Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
RFX4Q33E94 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 SNORD59.2-201ENST00000516873 68 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 RNU6-711P-201ENST00000517255 106 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC007458.1-201ENST00000542812 373 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.86□□□□□ -1.95
RFX4Q33E94 YWHAZP1-201ENST00000556286 722 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 MIR5708-201ENST00000579723 85 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC113368.1-201ENST00000603736 382 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC009464.1-201ENST00000615731 469 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC009269.6-201ENST00000621778 588 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AL157770.1-201ENST00000623049 439 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX4Q33E94 TEX41-300ENST00000631048 69 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX4Q33E94 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC2.86□□□□□ -1.95
RFX4Q33E94 MFSD8-245ENST00000641743 948 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
RFX4Q33E94 ZNF734P-201ENST00000419494 1534 ntBASIC2.86□□□□□ -1.95
RFX4Q33E94 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.86□□□□□ -1.95
RFX4Q33E94 AC103988.1-201ENST00000566382 2177 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX4Q33E94 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.85□□□□□ -1.95
RFX4Q33E94 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 HMGB1P5-201ENST00000255320 642 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 RNU6-50P-201ENST00000362356 103 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 RNU6-730P-201ENST00000383954 104 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 MIR122-201ENST00000385044 85 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 SNORD65.1-201ENST00000390889 71 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 SNORA26.7-201ENST00000391288 122 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC110754.1-201ENST00000399740 601 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL451074.5-201ENST00000415894 435 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 MTND4P3-201ENST00000417829 541 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL449283.1-202ENST00000418249 604 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 OR1AA1P-201ENST00000419597 916 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX4Q33E94 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.85□□□□□ -1.95
RFX4Q33E94 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX4Q33E94 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX4Q33E94 AC108734.1-201ENST00000439549 399 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC140076.1-201ENST00000449897 361 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 RPL36AP33-201ENST00000450395 310 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC079776.3-201ENST00000450665 370 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 GSTA11P-201ENST00000452866 669 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 HMGB1P15-201ENST00000453854 435 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL672167.3-201ENST00000465951 960 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 HMGB1P25-201ENST00000468402 607 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 PABPC1P3-201ENST00000469174 459 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC010285.1-201ENST00000470580 392 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 AC010374.2-201ENST00000512933 535 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX4Q33E94 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX4Q33E94 ARL2BPP5-201ENST00000523141 481 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.85□□□□□ -1.95
RFX4Q33E94 RPL21P12-201ENST00000559810 515 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC2.85□□□□□ -1.95
RFX4Q33E94 AC083760.1-201ENST00000589621 670 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC073387.2-201ENST00000604797 784 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL158050.2-201ENST00000605336 568 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC009237.15-201ENST00000610252 501 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL110115.1-201ENST00000614396 364 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AC010975.3-201ENST00000618727 978 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.85□□□□□ -1.95
RFX4Q33E94 AL590240.3-201ENST00000621416 943 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AL512506.2-201ENST00000624472 458 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 AP003485.1-201ENST00000625093 753 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 AL049781.1-201ENST00000623195 3585 ntBASIC2.85□□□□□ -1.95
RFX4Q33E94 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RFX4Q33E94 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
RFX4Q33E94 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RFX4Q33E94 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RFX4Q33E94 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX4Q33E94 MT-TC-201ENST00000387405 66 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 Y_RNA.578-201ENST00000390903 88 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.84□□□□□ -1.95
RFX4Q33E94 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.84□□□□□ -1.95
RFX4Q33E94 AL139281.1-201ENST00000422120 335 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 GTF2IP3-201ENST00000433887 494 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 SETP8-201ENST00000435341 628 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC005019.1-201ENST00000436455 431 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC241584.1-201ENST00000438469 1241 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC093155.1-201ENST00000440164 826 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.84□□□□□ -1.95
RFX4Q33E94 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC2.84□□□□□ -1.95
RFX4Q33E94 COX6CP2-201ENST00000444980 225 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 AC093392.2-201ENST00000450682 337 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 FCF1P6-201ENST00000456841 595 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 MTCO3P2-201ENST00000457365 171 ntBASIC2.84□□□□□ -1.95
RFX4Q33E94 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.84□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms