Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 RPS29P11-201ENST00000496507 171 ntBASIC3.52□□□□□ -1.85
HMGXB3Q12766 HMGB1P1-201ENST00000522557 636 ntBASIC3.52□□□□□ -1.85
HMGXB3Q12766 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 DNAJC19P9-201ENST00000555084 351 ntBASIC3.52□□□□□ -1.85
HMGXB3Q12766 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 MIR6733-201ENST00000635723 61 ntBASIC3.52□□□□□ -1.85
HMGXB3Q12766 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGXB3Q12766 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
HMGXB3Q12766 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
HMGXB3Q12766 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HMGXB3Q12766 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGXB3Q12766 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGXB3Q12766 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGXB3Q12766 LRRC37A5P-203ENST00000580181 585 ntBASIC3.51□□□□□ -1.85
HMGXB3Q12766 MIR5002-201ENST00000584713 97 ntBASIC3.51□□□□□ -1.85
HMGXB3Q12766 Y_RNA.783-201ENST00000613546 102 ntBASIC3.51□□□□□ -1.85
HMGXB3Q12766 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGXB3Q12766 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGXB3Q12766 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGXB3Q12766 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGXB3Q12766 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGXB3Q12766 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGXB3Q12766 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGXB3Q12766 AC092185.1-201ENST00000491371 97 ntBASIC3.5□□□□□ -1.85
HMGXB3Q12766 SNORA70.14-201ENST00000516205 110 ntBASIC3.5□□□□□ -1.85
HMGXB3Q12766 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGXB3Q12766 AC025260.1-201ENST00000548858 430 ntBASIC3.5□□□□□ -1.85
HMGXB3Q12766 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGXB3Q12766 ISCA1P3-201ENST00000577104 373 ntBASIC3.5□□□□□ -1.85
HMGXB3Q12766 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGXB3Q12766 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGXB3Q12766 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HMGXB3Q12766 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGXB3Q12766 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 AL139276.1-201ENST00000311910 1001 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 SNORA25.9-201ENST00000365087 128 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 RNU1-51P-201ENST00000365345 176 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 TAF9P1-201ENST00000445421 515 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 TAF9P2-201ENST00000454958 515 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 FAM92A1P1-201ENST00000528023 890 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 NDUFA5P6-201ENST00000542110 379 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGXB3Q12766 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 DEFA7P-201ENST00000382676 285 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 AC019129.1-201ENST00000403786 261 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 AL163540.1-201ENST00000485382 386 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 AC107918.3-201ENST00000533272 382 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.49□□□□□ -1.85
HMGXB3Q12766 MTCO3P13-201ENST00000577757 781 ntBASIC3.49□□□□□ -1.85
HMGXB3Q12766 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.48□□□□□ -1.85
HMGXB3Q12766 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HMGXB3Q12766 RPS15AP12-201ENST00000419498 388 ntBASIC3.48□□□□□ -1.85
HMGXB3Q12766 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.48□□□□□ -1.85
HMGXB3Q12766 SNRPGP9-201ENST00000456025 225 ntBASIC3.48□□□□□ -1.85
HMGXB3Q12766 snoU13.18-201ENST00000459483 104 ntBASIC3.48□□□□□ -1.85
HMGXB3Q12766 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.48□□□□□ -1.85
HMGXB3Q12766 RPS3AP4-201ENST00000555161 764 ntBASIC3.48□□□□□ -1.85
HMGXB3Q12766 OR4H12P-201ENST00000556269 907 ntBASIC3.48□□□□□ -1.85
HMGXB3Q12766 SUB1P3-201ENST00000564581 315 ntBASIC3.48□□□□□ -1.85
HMGXB3Q12766 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC3.47□□□□□ -1.85
HMGXB3Q12766 AC093909.5-201ENST00000621839 1799 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 SNORA67.5-201ENST00000391036 107 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 SNORA40.18-201ENST00000391200 128 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 TRIM60P18-201ENST00000441518 828 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 CBWD4P-201ENST00000445695 655 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGXB3Q12766 AL445669.2-201ENST00000454425 421 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 AC007182.2-201ENST00000489251 402 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 AC055855.1-201ENST00000489563 579 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 RPL23AP63-201ENST00000498752 471 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC3.47□□□□□ -1.85
HMGXB3Q12766 AP003385.6-201ENST00000531603 374 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 MIR4303-201ENST00000581299 66 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 AC084768.2-201ENST00000622736 221 ntBASIC3.47□□□□□ -1.85
HMGXB3Q12766 MIR6073-201ENST00000352083 89 ntBASIC3.46□□□□□ -1.86
HMGXB3Q12766 AL445685.2-201ENST00000422551 342 ntBASIC3.46□□□□□ -1.86
HMGXB3Q12766 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.46□□□□□ -1.86
HMGXB3Q12766 RPL23AP44-201ENST00000482216 473 ntBASIC3.46□□□□□ -1.86
HMGXB3Q12766 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HMGXB3Q12766 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.46□□□□□ -1.86
HMGXB3Q12766 VN1R79P-201ENST00000593540 513 ntBASIC3.46□□□□□ -1.86
HMGXB3Q12766 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.46□□□□□ -1.86
HMGXB3Q12766 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
HMGXB3Q12766 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
HMGXB3Q12766 SNORA51.11-201ENST00000384442 131 ntBASIC3.45□□□□□ -1.86
HMGXB3Q12766 AC009969.1-201ENST00000438726 172 ntBASIC3.45□□□□□ -1.86
HMGXB3Q12766 AL591719.1-201ENST00000444669 744 ntBASIC3.45□□□□□ -1.86
HMGXB3Q12766 AC023043.3-201ENST00000593113 385 ntBASIC3.45□□□□□ -1.86
HMGXB3Q12766 AC020895.1-201ENST00000595362 272 ntBASIC3.45□□□□□ -1.86
HMGXB3Q12766 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HMGXB3Q12766 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms