Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 MTATP6P18-201ENST00000417994 673 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AC093156.1-201ENST00000440382 670 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.15□□□□□ -1.59
SSRP1Q08945 AC108059.3-201ENST00000456388 214 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 UBDP1-202ENST00000457888 382 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 RPL21P126-201ENST00000470049 478 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC5.15□□□□□ -1.59
SSRP1Q08945 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC5.15□□□□□ -1.59
SSRP1Q08945 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.15□□□□□ -1.59
SSRP1Q08945 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.15□□□□□ -1.59
SSRP1Q08945 FTH1P21-201ENST00000512179 511 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AC074344.1-201ENST00000512823 224 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 RNU6-528P-201ENST00000516926 100 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.15□□□□□ -1.59
SSRP1Q08945 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.15□□□□□ -1.59
SSRP1Q08945 HNRNPCP4-201ENST00000571636 900 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.15□□□□□ -1.59
SSRP1Q08945 AP001330.5-201ENST00000607176 411 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 uc_338.18-201ENST00000615451 175 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AL356585.4-201ENST00000623078 1229 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AC007546.2-201ENST00000623996 360 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 AC019226.1-201ENST00000625666 515 ntBASIC5.15□□□□□ -1.59
SSRP1Q08945 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC5.15□□□□□ -1.59
SSRP1Q08945 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC5.15□□□□□ -1.59
SSRP1Q08945 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.15□□□□□ -1.59
SSRP1Q08945 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
SSRP1Q08945 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
SSRP1Q08945 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSRP1Q08945 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC022893.2-201ENST00000564832 3296 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSRP1Q08945 RNU6-169P-201ENST00000365336 107 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 RNA5SP332-201ENST00000391063 115 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSRP1Q08945 RPL23AP1-201ENST00000428990 471 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC5.14□□□□□ -1.59
SSRP1Q08945 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.14□□□□□ -1.59
SSRP1Q08945 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC005008.1-201ENST00000456151 612 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 RN7SL860P-201ENST00000473738 223 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 RPL21P103-201ENST00000479921 488 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC007686.1-201ENST00000488511 463 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC111000.3-201ENST00000508057 576 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.14□□□□□ -1.59
SSRP1Q08945 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC021146.1-201ENST00000511202 716 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC5.14□□□□□ -1.59
SSRP1Q08945 BNIP3P33-201ENST00000598912 569 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 RPL26P30-202ENST00000602923 645 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC008536.2-201ENST00000607284 349 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 Z98200.1-201ENST00000607298 470 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AL357078.3-201ENST00000607528 618 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC007038.2-201ENST00000608095 740 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC004908.2-201ENST00000609090 574 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 U73479.1-201ENST00000618062 168 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 AC009161.2-201ENST00000624626 138 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
SSRP1Q08945 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
SSRP1Q08945 CR848007.1-201ENST00000442354 1699 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
SSRP1Q08945 AC026951.1-201ENST00000559530 2459 ntBASIC5.14□□□□□ -1.59
SSRP1Q08945 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSRP1Q08945 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
SSRP1Q08945 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.13□□□□□ -1.59
SSRP1Q08945 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSRP1Q08945 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
SSRP1Q08945 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSRP1Q08945 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.13□□□□□ -1.59
SSRP1Q08945 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
SSRP1Q08945 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
SSRP1Q08945 Y_RNA.89-201ENST00000363031 102 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RNU6-263P-201ENST00000363811 107 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RNU6-1078P-201ENST00000364522 103 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 Y_RNA.295-201ENST00000364918 102 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 Y_RNA.303-201ENST00000364998 94 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RNA5SP22-201ENST00000365393 109 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RNU6-108P-201ENST00000365558 107 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RNU1-39P-201ENST00000383897 165 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 SNORA56-201ENST00000383966 129 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RNU6-483P-201ENST00000384088 108 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 MIR192-201ENST00000384915 110 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 MIR3065-201ENST00000390137 79 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 FGF7P8-201ENST00000402994 292 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 SNORA74C-2-201ENST00000411179 201 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RPL30P16-201ENST00000419341 429 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 AL353193.1-201ENST00000421444 268 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 AL391219.1-201ENST00000422570 483 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 CKS1BP5-201ENST00000434172 273 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 TPT1P14-201ENST00000448018 505 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RPL7L1P1-201ENST00000448259 785 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 RPS17P13-201ENST00000448974 407 ntBASIC5.13□□□□□ -1.59
SSRP1Q08945 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.13□□□□□ -1.59
SSRP1Q08945 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
SSRP1Q08945 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.13□□□□□ -1.59
SSRP1Q08945 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.13□□□□□ -1.59
SSRP1Q08945 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.13□□□□□ -1.59
SSRP1Q08945 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms