Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.58□□□□□ -1.84
GABPAQ06546 AL159169.1-201ENST00000421119 127 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 COTL1P1-201ENST00000422309 375 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AL035410.1-201ENST00000427409 427 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC3.58□□□□□ -1.84
GABPAQ06546 USP9YP22-201ENST00000438971 294 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AC004854.1-201ENST00000440356 349 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AL831737.1-201ENST00000441288 271 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AL031313.1-201ENST00000448435 256 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.58□□□□□ -1.84
GABPAQ06546 TRBV26-201ENST00000456572 344 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 HMGB3P30-201ENST00000457863 606 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 PNPLA4P1-201ENST00000458328 305 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.58□□□□□ -1.84
GABPAQ06546 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.58□□□□□ -1.84
GABPAQ06546 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.58□□□□□ -1.84
GABPAQ06546 AC087808.1-201ENST00000520501 361 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.58□□□□□ -1.84
GABPAQ06546 AP000889.1-201ENST00000530968 660 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.58□□□□□ -1.84
GABPAQ06546 MTCO2P2-201ENST00000591258 225 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 VN1R83P-201ENST00000595685 445 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AC021749.1-201ENST00000604322 607 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 HMGN2P28-201ENST00000606102 262 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.58□□□□□ -1.84
GABPAQ06546 AL138478.1-201ENST00000612252 832 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 ZNF734P-201ENST00000419494 1534 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 SAGE4P-201ENST00000442271 3381 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 MTND5P24-201ENST00000438892 1767 ntBASIC3.58□□□□□ -1.84
GABPAQ06546 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
GABPAQ06546 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
GABPAQ06546 SUGT1P1-201ENST00000379514 476 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 Y_RNA.510-201ENST00000384511 114 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 SNORA40.2-201ENST00000390847 128 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 U3.26-201ENST00000391236 204 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 SKINT1L-201ENST00000401057 817 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 RNU2-28P-201ENST00000410457 189 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 RNU2-42P-201ENST00000410697 113 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC106883.1-201ENST00000418805 562 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 MTCYBP24-201ENST00000420387 1106 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 OFD1P18Y-201ENST00000420889 959 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC007435.1-201ENST00000421086 415 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GABPAQ06546 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 OR10R1P-201ENST00000441524 1141 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AL034418.1-201ENST00000448675 860 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 DUXAP8-207ENST00000456786 622 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 SNORA59A-201ENST00000459326 152 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AP000873.1-201ENST00000463987 400 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.57□□□□□ -1.84
GABPAQ06546 TRAV31-201ENST00000502780 342 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 MTCO3P44-201ENST00000510977 541 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.57□□□□□ -1.84
GABPAQ06546 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.57□□□□□ -1.84
GABPAQ06546 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
GABPAQ06546 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 AC138915.2-201ENST00000569776 97 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC015688.2-201ENST00000584523 262 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 BNIP3P40-201ENST00000596017 556 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC113368.1-201ENST00000603736 382 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.57□□□□□ -1.84
GABPAQ06546 DUXAP10-204ENST00000612052 616 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GABPAQ06546 AC130650.2-201ENST00000618736 2403 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
GABPAQ06546 LINC02211-204ENST00000642024 1070 ntBASIC3.57□□□□□ -1.84
GABPAQ06546 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
GABPAQ06546 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
GABPAQ06546 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
GABPAQ06546 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GABPAQ06546 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC3.56□□□□□ -1.84
GABPAQ06546 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
GABPAQ06546 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
GABPAQ06546 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
GABPAQ06546 ZNF29P-201ENST00000225587 168 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
GABPAQ06546 RNU6-657P-201ENST00000383904 107 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 Y_RNA.493-201ENST00000384422 102 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 RNU4-78P-201ENST00000410940 126 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 MTCO2P8-201ENST00000412213 658 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 MRPS36P1-201ENST00000421291 307 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.56□□□□□ -1.84
GABPAQ06546 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.56□□□□□ -1.84
GABPAQ06546 AL645638.1-201ENST00000440519 361 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 MTCO1P48-201ENST00000448024 1096 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 TVP23BP2-201ENST00000455082 615 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 ST13P14-201ENST00000474095 734 ntBASIC3.56□□□□□ -1.84
GABPAQ06546 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms