Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC007342.9-201ENST00000623877 1385 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 SNORA18.3-201ENST00000384122 132 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AL138827.1-201ENST00000402666 306 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 RNA5SP56-201ENST00000410277 118 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 RPL7P30-201ENST00000420888 709 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AL160175.1-201ENST00000428124 247 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC126182.1-201ENST00000478134 357 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC108157.1-201ENST00000510511 539 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 SNORA31.21-201ENST00000517180 77 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 PRELID2P1-201ENST00000552837 301 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC080100.1-201ENST00000624239 5356 ntBASIC2.02□□□□□ -2.09
HIST1H1AQ02539 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.02□□□□□ -2.09
HIST1H1AQ02539 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 RNA5SP210-201ENST00000391034 120 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 SNORA48.5-201ENST00000391143 135 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 UBA52P6-201ENST00000399822 382 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 PRRC2CP1-201ENST00000404428 159 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 MTATP6P31-201ENST00000406985 692 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AL592148.1-201ENST00000413568 445 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AL139132.1-201ENST00000431587 344 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AL590762.3-201ENST00000436372 640 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 RPL23AP70-201ENST00000483361 460 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 HMGB3P3-201ENST00000510526 400 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC113155.1-201ENST00000511141 769 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC008494.2-201ENST00000514544 370 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 SNORA31.8-201ENST00000516327 108 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC067904.2-201ENST00000517322 1283 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC100870.1-201ENST00000522035 505 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC010306.1-201ENST00000523223 1117 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC121758.2-201ENST00000553271 193 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 MIR5092-201ENST00000583139 88 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AL669831.4-202ENST00000590817 238 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AL392048.1-201ENST00000613946 534 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AL442067.2-201ENST00000614033 363 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC068880.5-201ENST00000624331 290 ntBASIC2.01□□□□□ -2.09
HIST1H1AQ02539 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
HIST1H1AQ02539 AC008669.1-201ENST00000565823 2178 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HIST1H1AQ02539 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2□□□□□ -2.09
HIST1H1AQ02539 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2□□□□□ -2.09
HIST1H1AQ02539 UBE2Q2P12-201ENST00000414573 204 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AC073508.1-201ENST00000428866 656 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HIST1H1AQ02539 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 RPS24P13-201ENST00000442520 397 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC2□□□□□ -2.09
HIST1H1AQ02539 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2□□□□□ -2.09
HIST1H1AQ02539 RPS15AP34-201ENST00000487776 387 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AC111193.1-201ENST00000504097 155 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2□□□□□ -2.09
HIST1H1AQ02539 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 RNA5SP471-201ENST00000516971 106 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 SNORA70.24-201ENST00000517233 118 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2□□□□□ -2.09
HIST1H1AQ02539 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AP001804.3-201ENST00000525146 880 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC2□□□□□ -2.09
HIST1H1AQ02539 POLR2KP1-201ENST00000553226 168 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC007954.1-201ENST00000554198 494 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 AP005205.1-201ENST00000563503 508 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC087481.2-201ENST00000565492 330 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC090751.1-201ENST00000566966 267 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2□□□□□ -2.09
HIST1H1AQ02539 MIR5694-201ENST00000581190 76 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC090616.3-201ENST00000582184 217 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AL645944.1-201ENST00000603857 493 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms