Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
ABCA4P78363 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 ELOCP31-201ENST00000540463 467 ntBASIC2□□□□□ -2.09
ABCA4P78363 AC006116.7-201ENST00000590141 756 ntBASIC2□□□□□ -2.09
ABCA4P78363 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC2□□□□□ -2.09
ABCA4P78363 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2□□□□□ -2.09
ABCA4P78363 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.99□□□□□ -2.09
ABCA4P78363 Y_RNA.269-201ENST00000364685 89 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC1.99□□□□□ -2.09
ABCA4P78363 MIR181B1-201ENST00000385240 110 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC1.99□□□□□ -2.09
ABCA4P78363 VN1R17P-201ENST00000472048 1090 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC1.99□□□□□ -2.09
ABCA4P78363 SUB1P3-201ENST00000564581 315 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 MTCYBP28-201ENST00000566728 1132 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 MIR5007-201ENST00000583098 95 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 AC002076.2-201ENST00000617362 122 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 AL162233.1-201ENST00000620014 944 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 PISRT1-201ENST00000626175 531 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 MIR219B-201ENST00000637023 88 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.99□□□□□ -2.09
ABCA4P78363 NSRP1P1-201ENST00000444067 1693 ntBASIC1.99□□□□□ -2.09
ABCA4P78363 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
ABCA4P78363 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.99□□□□□ -2.09
ABCA4P78363 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA4P78363 RNU6-76P-201ENST00000384060 104 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 SAR1AP2-201ENST00000392696 594 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 RNU2-71P-201ENST00000411395 189 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 SDCBPP3-201ENST00000419629 891 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 MTND2P16-201ENST00000419987 799 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AC009414.1-201ENST00000427200 443 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AC007677.1-201ENST00000445757 515 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA4P78363 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCA4P78363 RNU6-1053P-201ENST00000515930 101 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AC018630.1-201ENST00000541376 925 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 MIR4781-201ENST00000585250 76 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AP003072.5-201ENST00000623872 773 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
ABCA4P78363 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCA4P78363 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
ABCA4P78363 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC1.98□□□□□ -2.09
ABCA4P78363 EFTUD1P2-201ENST00000514817 1603 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 FRG1BP-201ENST00000278882 761 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 SNORA25.9-201ENST00000365087 128 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 SNORA80E-201ENST00000384744 137 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.98□□□□□ -2.09
ABCA4P78363 AC124916.1-201ENST00000444020 547 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCA4P78363 PTGES3P5-201ENST00000455109 434 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA4P78363 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.98□□□□□ -2.09
ABCA4P78363 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA4P78363 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC1.98□□□□□ -2.09
ABCA4P78363 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.98□□□□□ -2.09
ABCA4P78363 AC016877.3-201ENST00000606778 504 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 MIR6766-201ENST00000622641 72 ntBASIC1.98□□□□□ -2.09
ABCA4P78363 AL356292.1-201ENST00000283110 373 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA4P78363 XKRYP4-201ENST00000414395 483 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA4P78363 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA4P78363 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA4P78363 XKRYP5-201ENST00000449659 483 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA4P78363 RN7SL297P-201ENST00000483161 293 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA4P78363 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA4P78363 OR4A45P-201ENST00000529954 901 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 OR7K1P-201ENST00000546439 926 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA4P78363 AC107294.3-201ENST00000609211 526 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC006023.2-201ENST00000609916 167 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC009318.2-201ENST00000610917 651 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 MIR7973-1-201ENST00000614683 76 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC084035.1-201ENST00000634543 607 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.97□□□□□ -2.09
ABCA4P78363 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.97□□□□□ -2.09
ABCA4P78363 AC016717.2-201ENST00000609089 5141 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC096656.1-201ENST00000623826 1364 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA4P78363 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ABCA4P78363 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.97□□□□□ -2.09
ABCA4P78363 AC010881.1-201ENST00000433830 235 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC1.97□□□□□ -2.09
ABCA4P78363 XKRY-201ENST00000510392 1100 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 HMGB1P41-201ENST00000520234 440 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 OR5BN1P-201ENST00000532955 829 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
ABCA4P78363 AP000942.3-201ENST00000603702 160 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC1.97□□□□□ -2.09
ABCA4P78363 AL136164.4-201ENST00000625013 2135 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 FAM35CP-201ENST00000554755 2470 ntBASIC1.97□□□□□ -2.09
ABCA4P78363 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
ABCA4P78363 AC009501.3-201ENST00000605001 1352 ntBASIC1.96□□□□□ -2.09
ABCA4P78363 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.96□□□□□ -2.09
ABCA4P78363 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
ABCA4P78363 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.96□□□□□ -2.1
ABCA4P78363 MIR21-201ENST00000362134 72 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms