Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC2.91□□□□□ -1.94
TPM4P67936 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TPM4P67936 AL049779.4-201ENST00000604500 156 ntBASIC2.91□□□□□ -1.94
TPM4P67936 AC004775.1-201ENST00000607389 753 ntBASIC2.91□□□□□ -1.94
TPM4P67936 AC006133.1-201ENST00000617106 264 ntBASIC2.91□□□□□ -1.94
TPM4P67936 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
TPM4P67936 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
TPM4P67936 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.91□□□□□ -1.94
TPM4P67936 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
TPM4P67936 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
TPM4P67936 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.9□□□□□ -1.94
TPM4P67936 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TPM4P67936 RNA5SP374-201ENST00000362939 125 ntBASIC2.9□□□□□ -1.95
TPM4P67936 Y_RNA.126-201ENST00000363382 111 ntBASIC2.9□□□□□ -1.95
TPM4P67936 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.9□□□□□ -1.95
TPM4P67936 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM4P67936 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
TPM4P67936 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
TPM4P67936 SNORA1.3-201ENST00000384676 136 ntBASIC2.9□□□□□ -1.95
TPM4P67936 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.9□□□□□ -1.95
TPM4P67936 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
TPM4P67936 MRPS33P4-201ENST00000434892 317 ntBASIC2.9□□□□□ -1.95
TPM4P67936 UBE2V1P5-201ENST00000440070 405 ntBASIC2.9□□□□□ -1.95
TPM4P67936 AC011816.1-201ENST00000441346 546 ntBASIC2.9□□□□□ -1.95
TPM4P67936 VN1R34P-201ENST00000447387 883 ntBASIC2.9□□□□□ -1.95
TPM4P67936 AL358832.1-201ENST00000497800 389 ntBASIC2.9□□□□□ -1.95
TPM4P67936 SEM1P1-201ENST00000506694 209 ntBASIC2.9□□□□□ -1.95
TPM4P67936 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM4P67936 AC074250.1-201ENST00000511117 192 ntBASIC2.9□□□□□ -1.95
TPM4P67936 SNORA31.11-201ENST00000516528 139 ntBASIC2.9□□□□□ -1.95
TPM4P67936 SNORA31.21-201ENST00000517180 77 ntBASIC2.9□□□□□ -1.95
TPM4P67936 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
TPM4P67936 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.9□□□□□ -1.95
TPM4P67936 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM4P67936 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.9□□□□□ -1.95
TPM4P67936 AC084757.4-201ENST00000616350 526 ntBASIC2.9□□□□□ -1.95
TPM4P67936 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.9□□□□□ -1.95
TPM4P67936 FO624990.1-201ENST00000636373 85 ntBASIC2.9□□□□□ -1.95
TPM4P67936 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AL512283.1-201ENST00000606756 1384 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AC099654.7-201ENST00000635788 2127 ntBASIC2.89□□□□□ -1.95
TPM4P67936 RNA5SP139-201ENST00000364340 117 ntBASIC2.89□□□□□ -1.95
TPM4P67936 USP9YP20-201ENST00000419224 558 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.89□□□□□ -1.95
TPM4P67936 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.89□□□□□ -1.95
TPM4P67936 AC234775.1-201ENST00000454247 670 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AP000852.1-201ENST00000472460 573 ntBASIC2.89□□□□□ -1.95
TPM4P67936 SETP11-201ENST00000473027 690 ntBASIC2.89□□□□□ -1.95
TPM4P67936 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TPM4P67936 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TPM4P67936 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.89□□□□□ -1.95
TPM4P67936 SNORA67.7-201ENST00000516664 135 ntBASIC2.89□□□□□ -1.95
TPM4P67936 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.89□□□□□ -1.95
TPM4P67936 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.89□□□□□ -1.95
TPM4P67936 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.89□□□□□ -1.95
TPM4P67936 RPL12P50-201ENST00000603116 116 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AC025588.3-201ENST00000604182 274 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AL513477.2-201ENST00000607858 568 ntBASIC2.89□□□□□ -1.95
TPM4P67936 VN1R7P-201ENST00000619242 903 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AL161637.1-201ENST00000622380 412 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AL109659.3-201ENST00000624985 950 ntBASIC2.89□□□□□ -1.95
TPM4P67936 AC068620.4-201ENST00000636730 1182 ntBASIC2.89□□□□□ -1.95
TPM4P67936 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
TPM4P67936 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TPM4P67936 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.89□□□□□ -1.95
TPM4P67936 AC244517.1-201ENST00000606030 2086 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AL672167.1-206ENST00000356293 943 ntBASIC2.88□□□□□ -1.95
TPM4P67936 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TPM4P67936 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TPM4P67936 BX682237.1-201ENST00000415016 335 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AC008280.1-201ENST00000418851 412 ntBASIC2.88□□□□□ -1.95
TPM4P67936 FNDC3CP-201ENST00000420795 1155 ntBASIC2.88□□□□□ -1.95
TPM4P67936 NIPA2P1-201ENST00000426223 976 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AL512649.1-201ENST00000428997 581 ntBASIC2.88□□□□□ -1.95
TPM4P67936 OR51B8P-201ENST00000449892 769 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC2.88□□□□□ -1.95
TPM4P67936 AC015724.1-201ENST00000478577 156 ntBASIC2.88□□□□□ -1.95
TPM4P67936 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.88□□□□□ -1.95
TPM4P67936 CCNG2P1-201ENST00000549521 1000 ntBASIC2.88□□□□□ -1.95
TPM4P67936 EIF1AXP2-201ENST00000555940 413 ntBASIC2.88□□□□□ -1.95
TPM4P67936 RPL23AP78-201ENST00000599928 470 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AC022387.2-201ENST00000604050 448 ntBASIC2.88□□□□□ -1.95
TPM4P67936 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.88□□□□□ -1.95
TPM4P67936 HSPE1P14-201ENST00000605812 302 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AL137847.3-201ENST00000611521 109 ntBASIC2.88□□□□□ -1.95
TPM4P67936 AC090116.1-201ENST00000615679 446 ntBASIC2.88□□□□□ -1.95
TPM4P67936 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.88□□□□□ -1.95
TPM4P67936 MTND2P41-201ENST00000637599 773 ntBASIC2.88□□□□□ -1.95
TPM4P67936 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
TPM4P67936 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.88□□□□□ -1.95
TPM4P67936 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.87□□□□□ -1.95
TPM4P67936 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
TPM4P67936 RNU6-543P-201ENST00000362576 108 ntBASIC2.87□□□□□ -1.95
TPM4P67936 RNU1-140P-201ENST00000365040 165 ntBASIC2.87□□□□□ -1.95
TPM4P67936 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
TPM4P67936 RNU1-138P-201ENST00000384093 164 ntBASIC2.87□□□□□ -1.95
TPM4P67936 FABP12P1-201ENST00000401911 322 ntBASIC2.87□□□□□ -1.95
TPM4P67936 AL162578.1-201ENST00000406202 378 ntBASIC2.87□□□□□ -1.95
TPM4P67936 RNU6-272P-201ENST00000411028 104 ntBASIC2.87□□□□□ -1.95
TPM4P67936 RPL35AP12-201ENST00000425362 338 ntBASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms