Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 MIR5195-201ENST00000583555 115 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.41□□□□□ -1.86
SRP54P61011 AL365400.2-201ENST00000605604 902 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AL355810.1-201ENST00000614629 552 ntBASIC3.41□□□□□ -1.86
SRP54P61011 PLCE1P1-201ENST00000622094 305 ntBASIC3.41□□□□□ -1.86
SRP54P61011 AL353748.2-201ENST00000622148 471 ntBASIC3.41□□□□□ -1.86
SRP54P61011 MIR1322-201ENST00000638013 71 ntBASIC3.41□□□□□ -1.86
SRP54P61011 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.41□□□□□ -1.86
SRP54P61011 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 MTND5P27-201ENST00000428871 1720 ntBASIC3.41□□□□□ -1.86
SRP54P61011 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
SRP54P61011 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.41□□□□□ -1.86
SRP54P61011 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SRP54P61011 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.4□□□□□ -1.86
SRP54P61011 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP54P61011 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.4□□□□□ -1.87
SRP54P61011 RNA5SP120-201ENST00000410900 112 ntBASIC3.4□□□□□ -1.87
SRP54P61011 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP54P61011 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 OFD1P3Y-201ENST00000453312 783 ntBASIC3.4□□□□□ -1.87
SRP54P61011 BX510359.1-201ENST00000456973 237 ntBASIC3.4□□□□□ -1.87
SRP54P61011 AC093663.1-201ENST00000497190 394 ntBASIC3.4□□□□□ -1.87
SRP54P61011 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.4□□□□□ -1.87
SRP54P61011 AC026427.2-201ENST00000506228 536 ntBASIC3.4□□□□□ -1.87
SRP54P61011 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 RPL12P22-201ENST00000519073 490 ntBASIC3.4□□□□□ -1.87
SRP54P61011 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.4□□□□□ -1.87
SRP54P61011 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 HSPA8P13-201ENST00000523715 472 ntBASIC3.4□□□□□ -1.87
SRP54P61011 SLC2A13P1-201ENST00000531560 322 ntBASIC3.4□□□□□ -1.87
SRP54P61011 SETP7-201ENST00000552169 453 ntBASIC3.4□□□□□ -1.87
SRP54P61011 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.4□□□□□ -1.87
SRP54P61011 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.4□□□□□ -1.87
SRP54P61011 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.4□□□□□ -1.87
SRP54P61011 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP54P61011 AC006557.5-201ENST00000603126 811 ntBASIC3.4□□□□□ -1.87
SRP54P61011 AC069304.2-201ENST00000605154 435 ntBASIC3.4□□□□□ -1.87
SRP54P61011 AC080013.4-201ENST00000607624 649 ntBASIC3.4□□□□□ -1.87
SRP54P61011 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP54P61011 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.4□□□□□ -1.87
SRP54P61011 AL442067.2-201ENST00000614033 363 ntBASIC3.4□□□□□ -1.87
SRP54P61011 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP54P61011 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP54P61011 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
SRP54P61011 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.39□□□□□ -1.87
SRP54P61011 SGO1P2-201ENST00000429458 1589 ntBASIC3.39□□□□□ -1.87
SRP54P61011 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.39□□□□□ -1.87
SRP54P61011 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SRP54P61011 OR5H2-201ENST00000355273 945 ntBASIC3.39□□□□□ -1.87
SRP54P61011 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SRP54P61011 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SRP54P61011 RN7SKP111-201ENST00000410349 271 ntBASIC3.39□□□□□ -1.87
SRP54P61011 RPL7P30-201ENST00000420888 709 ntBASIC3.39□□□□□ -1.87
SRP54P61011 TRIAP1P1-201ENST00000427062 225 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AC005326.1-201ENST00000429197 123 ntBASIC3.39□□□□□ -1.87
SRP54P61011 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.39□□□□□ -1.87
SRP54P61011 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
SRP54P61011 Z82190.1-201ENST00000454534 490 ntBASIC3.39□□□□□ -1.87
SRP54P61011 MTND2P39-201ENST00000457230 764 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AC092754.2-201ENST00000463506 460 ntBASIC3.39□□□□□ -1.87
SRP54P61011 RN7SL807P-201ENST00000470923 297 ntBASIC3.39□□□□□ -1.87
SRP54P61011 ST13P14-201ENST00000474095 734 ntBASIC3.39□□□□□ -1.87
SRP54P61011 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 MLLT10P2-201ENST00000506434 249 ntBASIC3.39□□□□□ -1.87
SRP54P61011 KLHL2P1-201ENST00000508691 521 ntBASIC3.39□□□□□ -1.87
SRP54P61011 FCF1P8-201ENST00000510322 597 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.39□□□□□ -1.87
SRP54P61011 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.39□□□□□ -1.87
SRP54P61011 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.39□□□□□ -1.87
SRP54P61011 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 SNRPGP16-201ENST00000533275 226 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AC005832.3-201ENST00000537929 631 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.39□□□□□ -1.87
SRP54P61011 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.39□□□□□ -1.87
SRP54P61011 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.39□□□□□ -1.87
SRP54P61011 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.39□□□□□ -1.87
SRP54P61011 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.39□□□□□ -1.87
SRP54P61011 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.39□□□□□ -1.87
SRP54P61011 AC021749.1-201ENST00000604322 607 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AL390240.1-201ENST00000612950 384 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AL158163.2-201ENST00000619110 700 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AL356585.4-201ENST00000623078 1229 ntBASIC3.39□□□□□ -1.87
SRP54P61011 AL136164.4-201ENST00000625013 2135 ntBASIC3.39□□□□□ -1.87
SRP54P61011 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.39□□□□□ -1.87
SRP54P61011 LINC02211-204ENST00000642024 1070 ntBASIC3.39□□□□□ -1.87
SRP54P61011 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
SRP54P61011 AL079305.1-201ENST00000623159 3008 ntBASIC3.38□□□□□ -1.87
SRP54P61011 PWAR6-201ENST00000552334 4618 ntBASIC3.38□□□□□ -1.87
SRP54P61011 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms