Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.85□□□□□ -1.95
VSX2P58304 AC139713.2-210ENST00000641741 992 ntBASIC2.85□□□□□ -1.95
VSX2P58304 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
VSX2P58304 MAPK10-266ENST00000641066 6555 ntBASIC2.85□□□□□ -1.95
VSX2P58304 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.85□□□□□ -1.95
VSX2P58304 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
VSX2P58304 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
VSX2P58304 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VSX2P58304 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VSX2P58304 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
VSX2P58304 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
VSX2P58304 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
VSX2P58304 RNA5SP258-201ENST00000362750 119 ntBASIC2.84□□□□□ -1.95
VSX2P58304 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.84□□□□□ -1.95
VSX2P58304 SNORA44-201ENST00000384584 132 ntBASIC2.84□□□□□ -1.95
VSX2P58304 U3.26-201ENST00000391236 204 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AL122016.1-201ENST00000403365 367 ntBASIC2.84□□□□□ -1.95
VSX2P58304 RNU2-72P-201ENST00000411175 163 ntBASIC2.84□□□□□ -1.95
VSX2P58304 BMS1P22-201ENST00000414726 313 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.84□□□□□ -1.95
VSX2P58304 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.84□□□□□ -1.95
VSX2P58304 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AC093151.1-201ENST00000427711 313 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 UQCRHP3-201ENST00000451503 251 ntBASIC2.84□□□□□ -1.95
VSX2P58304 HMGN3P1-201ENST00000453847 193 ntBASIC2.84□□□□□ -1.95
VSX2P58304 SNORA59A-201ENST00000459326 152 ntBASIC2.84□□□□□ -1.95
VSX2P58304 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.84□□□□□ -1.95
VSX2P58304 AC080014.1-201ENST00000496877 1201 ntBASIC2.84□□□□□ -1.95
VSX2P58304 OR5H5P-201ENST00000503164 928 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.84□□□□□ -1.95
VSX2P58304 SCGB1D5P-201ENST00000515134 247 ntBASIC2.84□□□□□ -1.95
VSX2P58304 SNORA31.26-201ENST00000517250 137 ntBASIC2.84□□□□□ -1.95
VSX2P58304 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.84□□□□□ -1.95
VSX2P58304 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AP001207.1-201ENST00000524051 481 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.84□□□□□ -1.95
VSX2P58304 AP002906.1-201ENST00000603405 233 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AL158211.2-201ENST00000607282 395 ntBASIC2.84□□□□□ -1.95
VSX2P58304 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
VSX2P58304 AC068880.4-201ENST00000623082 495 ntBASIC2.84□□□□□ -1.95
VSX2P58304 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.84□□□□□ -1.95
VSX2P58304 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC2.84□□□□□ -1.95
VSX2P58304 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.95
VSX2P58304 AL365361.1-201ENST00000566942 3481 ntBASIC2.84□□□□□ -1.95
VSX2P58304 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.96
VSX2P58304 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.96
VSX2P58304 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC2.84□□□□□ -1.96
VSX2P58304 AC130650.2-201ENST00000618736 2403 ntBASIC2.83□□□□□ -1.96
VSX2P58304 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
VSX2P58304 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.83□□□□□ -1.96
VSX2P58304 RNU6-582P-201ENST00000362989 107 ntBASIC2.83□□□□□ -1.96
VSX2P58304 RNU6-730P-201ENST00000383954 104 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AL031121.1-201ENST00000406553 254 ntBASIC2.83□□□□□ -1.96
VSX2P58304 MIR1250-201ENST00000408098 113 ntBASIC2.83□□□□□ -1.96
VSX2P58304 RN7SKP58-201ENST00000411010 305 ntBASIC2.83□□□□□ -1.96
VSX2P58304 RNU2-71P-201ENST00000411395 189 ntBASIC2.83□□□□□ -1.96
VSX2P58304 EEF1A1P41-201ENST00000414667 207 ntBASIC2.83□□□□□ -1.96
VSX2P58304 FCF1P2-201ENST00000415284 583 ntBASIC2.83□□□□□ -1.96
VSX2P58304 HSPE1P1-201ENST00000421494 318 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC005345.1-201ENST00000431868 217 ntBASIC2.83□□□□□ -1.96
VSX2P58304 RPS7P2-201ENST00000435134 607 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AL831737.1-201ENST00000441288 271 ntBASIC2.83□□□□□ -1.96
VSX2P58304 COX6CP18-201ENST00000448769 222 ntBASIC2.83□□□□□ -1.96
VSX2P58304 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC2.83□□□□□ -1.96
VSX2P58304 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC2.83□□□□□ -1.96
VSX2P58304 AC010285.1-201ENST00000470580 392 ntBASIC2.83□□□□□ -1.96
VSX2P58304 RPS26P21-201ENST00000475397 348 ntBASIC2.83□□□□□ -1.96
VSX2P58304 HMGN2P13-201ENST00000476476 274 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC084024.2-201ENST00000503480 791 ntBASIC2.83□□□□□ -1.96
VSX2P58304 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.83□□□□□ -1.96
VSX2P58304 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
VSX2P58304 AC008628.1-201ENST00000508663 265 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC048346.1-201ENST00000510247 144 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 RNU6-885P-201ENST00000516607 104 ntBASIC2.83□□□□□ -1.96
VSX2P58304 SNORA31.20-201ENST00000517111 133 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC109635.4-202ENST00000531666 412 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.83□□□□□ -1.96
VSX2P58304 EIF4BP1-201ENST00000554881 351 ntBASIC2.83□□□□□ -1.96
VSX2P58304 LARP7P3-201ENST00000579888 337 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC2.83□□□□□ -1.96
VSX2P58304 AC093732.2-201ENST00000607950 274 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 AL390240.1-201ENST00000612950 384 ntBASIC2.83□□□□□ -1.96
VSX2P58304 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 CYCSP41-201ENST00000616920 296 ntBASIC2.83□□□□□ -1.96
VSX2P58304 AC078880.5-201ENST00000617845 421 ntBASIC2.83□□□□□ -1.96
VSX2P58304 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.83□□□□□ -1.96
VSX2P58304 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.83□□□□□ -1.96
VSX2P58304 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.83□□□□□ -1.96
VSX2P58304 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms