Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC090116.1-201ENST00000615679 446 ntBASIC3.19□□□□□ -1.9
ACLYP53396 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.19□□□□□ -1.9
ACLYP53396 U1.39-201ENST00000621562 146 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC106730.3-201ENST00000624568 641 ntBASIC3.19□□□□□ -1.9
ACLYP53396 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.19□□□□□ -1.9
ACLYP53396 MTND4P34-201ENST00000572715 1371 ntBASIC3.19□□□□□ -1.9
ACLYP53396 AC117529.2-201ENST00000512159 2068 ntBASIC3.19□□□□□ -1.9
ACLYP53396 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
ACLYP53396 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.19□□□□□ -1.9
ACLYP53396 ZNF826P-207ENST00000622273 1910 ntBASIC3.19□□□□□ -1.9
ACLYP53396 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ACLYP53396 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 RNA5SP293-201ENST00000410527 113 ntBASIC3.18□□□□□ -1.9
ACLYP53396 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.18□□□□□ -1.9
ACLYP53396 MRPL50P2-201ENST00000416821 482 ntBASIC3.18□□□□□ -1.9
ACLYP53396 DUTP6-201ENST00000425573 462 ntBASIC3.18□□□□□ -1.9
ACLYP53396 ARL5AP4-201ENST00000430731 512 ntBASIC3.18□□□□□ -1.9
ACLYP53396 MYL8P-204ENST00000431574 518 ntBASIC3.18□□□□□ -1.9
ACLYP53396 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.18□□□□□ -1.9
ACLYP53396 B3GNT2P1-201ENST00000434960 952 ntBASIC3.18□□□□□ -1.9
ACLYP53396 AL121890.1-201ENST00000435457 205 ntBASIC3.18□□□□□ -1.9
ACLYP53396 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 AL096803.2-201ENST00000450032 677 ntBASIC3.18□□□□□ -1.9
ACLYP53396 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.18□□□□□ -1.9
ACLYP53396 AL049830.2-201ENST00000480072 201 ntBASIC3.18□□□□□ -1.9
ACLYP53396 AP001025.2-201ENST00000490908 477 ntBASIC3.18□□□□□ -1.9
ACLYP53396 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.18□□□□□ -1.9
ACLYP53396 MTCO2P32-201ENST00000514865 403 ntBASIC3.18□□□□□ -1.9
ACLYP53396 RNA5SP217-201ENST00000515959 91 ntBASIC3.18□□□□□ -1.9
ACLYP53396 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.18□□□□□ -1.9
ACLYP53396 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
ACLYP53396 AC011611.5-201ENST00000552477 578 ntBASIC3.18□□□□□ -1.9
ACLYP53396 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.18□□□□□ -1.9
ACLYP53396 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.18□□□□□ -1.9
ACLYP53396 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.18□□□□□ -1.9
ACLYP53396 RN7SL622P-201ENST00000585292 275 ntBASIC3.18□□□□□ -1.9
ACLYP53396 DPRXP5-201ENST00000604662 539 ntBASIC3.18□□□□□ -1.9
ACLYP53396 AC093010.3-201ENST00000570269 15214 ntBASIC3.18□□□□□ -1.9
ACLYP53396 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.18□□□□□ -1.9
ACLYP53396 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
ACLYP53396 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.18□□□□□ -1.9
ACLYP53396 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ACLYP53396 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACLYP53396 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ACLYP53396 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.17□□□□□ -1.9
ACLYP53396 RPL7P26-201ENST00000333817 754 ntBASIC3.17□□□□□ -1.9
ACLYP53396 RNU6-989P-201ENST00000362756 107 ntBASIC3.17□□□□□ -1.9
ACLYP53396 XGY1-201ENST00000381172 446 ntBASIC3.17□□□□□ -1.9
ACLYP53396 MIR16-1-201ENST00000385271 89 ntBASIC3.17□□□□□ -1.9
ACLYP53396 RSL24D1P4-201ENST00000400938 484 ntBASIC3.17□□□□□ -1.9
ACLYP53396 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
ACLYP53396 RNA5SP31-201ENST00000411144 127 ntBASIC3.17□□□□□ -1.9
ACLYP53396 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.17□□□□□ -1.9
ACLYP53396 AC006548.1-201ENST00000427470 102 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.17□□□□□ -1.9
ACLYP53396 AC004022.1-201ENST00000447766 1066 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.17□□□□□ -1.9
ACLYP53396 NAP1L1P3-201ENST00000462291 880 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.17□□□□□ -1.9
ACLYP53396 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.17□□□□□ -1.9
ACLYP53396 AC108078.3-201ENST00000502633 489 ntBASIC3.17□□□□□ -1.9
ACLYP53396 OR5H3P-201ENST00000502817 919 ntBASIC3.17□□□□□ -1.9
ACLYP53396 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.17□□□□□ -1.9
ACLYP53396 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.17□□□□□ -1.9
ACLYP53396 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.17□□□□□ -1.9
ACLYP53396 AL355812.1-201ENST00000603215 216 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AC107294.3-201ENST00000609211 526 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AC087241.4-201ENST00000612441 480 ntBASIC3.17□□□□□ -1.9
ACLYP53396 MIR8084-201ENST00000614105 89 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AC098679.5-201ENST00000624394 571 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AC097372.4-201ENST00000625025 466 ntBASIC3.17□□□□□ -1.9
ACLYP53396 CR381572.1-201ENST00000625098 102 ntBASIC3.17□□□□□ -1.9
ACLYP53396 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.17□□□□□ -1.9
ACLYP53396 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.17□□□□□ -1.9
ACLYP53396 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACLYP53396 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ACLYP53396 SGO1P1-201ENST00000603525 1447 ntBASIC3.17□□□□□ -1.9
ACLYP53396 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
ACLYP53396 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ACLYP53396 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
ACLYP53396 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ACLYP53396 RNU6-859P-201ENST00000362728 107 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RNA5SP258-201ENST00000362750 119 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RNA5SP383-201ENST00000362934 120 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RNVU1-3-201ENST00000364313 161 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RNU1-112P-201ENST00000364401 164 ntBASIC3.16□□□□□ -1.9
ACLYP53396 DEFB109C-201ENST00000382575 264 ntBASIC3.16□□□□□ -1.9
ACLYP53396 DEFB109B-201ENST00000382656 264 ntBASIC3.16□□□□□ -1.9
ACLYP53396 MIR9-1-201ENST00000385198 89 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AL138827.1-201ENST00000402666 306 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RNA5SP129-201ENST00000410276 118 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RPL32P35-201ENST00000415214 394 ntBASIC3.16□□□□□ -1.9
ACLYP53396 RAD23BP2-201ENST00000416003 1207 ntBASIC3.16□□□□□ -1.9
ACLYP53396 FNDC3CP-201ENST00000420795 1155 ntBASIC3.16□□□□□ -1.9
ACLYP53396 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.16□□□□□ -1.9
ACLYP53396 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms