Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 AC146507.1-201ENST00000468335 354 ntBASIC3.58□□□□□ -1.84
PDX1P52945 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDX1P52945 BET1P1-201ENST00000482276 359 ntBASIC3.58□□□□□ -1.84
PDX1P52945 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
PDX1P52945 AC112198.1-201ENST00000505369 1220 ntBASIC3.58□□□□□ -1.84
PDX1P52945 HSPD1P15-201ENST00000505573 1122 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC026427.2-201ENST00000506228 536 ntBASIC3.58□□□□□ -1.84
PDX1P52945 BTF3L4P4-201ENST00000506381 449 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC111000.2-201ENST00000507775 550 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.58□□□□□ -1.84
PDX1P52945 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 HSPA8P13-201ENST00000523715 472 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 AC024224.1-201ENST00000538284 609 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.58□□□□□ -1.84
PDX1P52945 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.58□□□□□ -1.84
PDX1P52945 AC107954.1-201ENST00000565906 727 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 MIR5195-201ENST00000583555 115 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AL031985.2-201ENST00000600955 480 ntBASIC3.58□□□□□ -1.84
PDX1P52945 RPL23AP92-201ENST00000603609 255 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AL160281.1-201ENST00000605307 311 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC006329.2-201ENST00000611491 394 ntBASIC3.58□□□□□ -1.84
PDX1P52945 AC004825.2-201ENST00000616634 455 ntBASIC3.58□□□□□ -1.84
PDX1P52945 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.58□□□□□ -1.84
PDX1P52945 AC032011.1-201ENST00000611703 1549 ntBASIC3.58□□□□□ -1.84
PDX1P52945 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.58□□□□□ -1.84
PDX1P52945 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.57□□□□□ -1.84
PDX1P52945 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
PDX1P52945 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDX1P52945 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
PDX1P52945 RNU1-89P-201ENST00000384592 164 ntBASIC3.57□□□□□ -1.84
PDX1P52945 HLFP1-201ENST00000402375 499 ntBASIC3.57□□□□□ -1.84
PDX1P52945 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDX1P52945 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.57□□□□□ -1.84
PDX1P52945 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.57□□□□□ -1.84
PDX1P52945 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.57□□□□□ -1.84
PDX1P52945 AL035407.1-201ENST00000429211 571 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.57□□□□□ -1.84
PDX1P52945 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.57□□□□□ -1.84
PDX1P52945 AC092641.1-201ENST00000440229 772 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.57□□□□□ -1.84
PDX1P52945 CYCSP35-201ENST00000451978 304 ntBASIC3.57□□□□□ -1.84
PDX1P52945 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.57□□□□□ -1.84
PDX1P52945 snoU13.3-201ENST00000459441 104 ntBASIC3.57□□□□□ -1.84
PDX1P52945 RPS4XP10-201ENST00000465034 731 ntBASIC3.57□□□□□ -1.84
PDX1P52945 RPL31P50-201ENST00000471002 296 ntBASIC3.57□□□□□ -1.84
PDX1P52945 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.57□□□□□ -1.84
PDX1P52945 HMGB1P36-201ENST00000487709 576 ntBASIC3.57□□□□□ -1.84
PDX1P52945 TRBV12-2-201ENST00000489763 344 ntBASIC3.57□□□□□ -1.84
PDX1P52945 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.57□□□□□ -1.84
PDX1P52945 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.57□□□□□ -1.84
PDX1P52945 AC004069.2-201ENST00000505438 1114 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC005178.1-201ENST00000508392 440 ntBASIC3.57□□□□□ -1.84
PDX1P52945 RNU6-27P-201ENST00000516146 107 ntBASIC3.57□□□□□ -1.84
PDX1P52945 MIR2114-201ENST00000516645 80 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC239860.2-201ENST00000525886 270 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.57□□□□□ -1.84
PDX1P52945 AC037471.2-201ENST00000564941 598 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC109446.2-201ENST00000567872 497 ntBASIC3.57□□□□□ -1.84
PDX1P52945 ZNF415P1-201ENST00000582279 1166 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.57□□□□□ -1.84
PDX1P52945 VN1R92P-201ENST00000598511 928 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AF131215.7-201ENST00000602443 707 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AL137849.1-201ENST00000604767 169 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC010738.1-201ENST00000604970 987 ntBASIC3.57□□□□□ -1.84
PDX1P52945 OR6R2P-201ENST00000609216 300 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC004009.2-201ENST00000623016 728 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AL356596.1-201ENST00000624230 379 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC092192.1-201ENST00000633154 1018 ntBASIC3.57□□□□□ -1.84
PDX1P52945 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.57□□□□□ -1.84
PDX1P52945 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.57□□□□□ -1.84
PDX1P52945 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
PDX1P52945 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.56□□□□□ -1.84
PDX1P52945 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.56□□□□□ -1.84
PDX1P52945 AC007823.1-201ENST00000569932 1566 ntBASIC3.56□□□□□ -1.84
PDX1P52945 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
PDX1P52945 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 AL021368.2-201ENST00000606125 5352 ntBASIC3.56□□□□□ -1.84
PDX1P52945 Y_RNA.18-201ENST00000362461 102 ntBASIC3.56□□□□□ -1.84
PDX1P52945 SNORD9-201ENST00000362566 104 ntBASIC3.56□□□□□ -1.84
PDX1P52945 RNU6-289P-201ENST00000364093 107 ntBASIC3.56□□□□□ -1.84
PDX1P52945 RNA5SP267-201ENST00000364893 126 ntBASIC3.56□□□□□ -1.84
PDX1P52945 MIR3074-201ENST00000384885 81 ntBASIC3.56□□□□□ -1.84
PDX1P52945 MIR1250-201ENST00000408098 113 ntBASIC3.56□□□□□ -1.84
PDX1P52945 RNU4-78P-201ENST00000410940 126 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.56□□□□□ -1.84
PDX1P52945 RPS7P15-201ENST00000415804 584 ntBASIC3.56□□□□□ -1.84
PDX1P52945 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
PDX1P52945 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.56□□□□□ -1.84
PDX1P52945 AC012065.2-201ENST00000421295 375 ntBASIC3.56□□□□□ -1.84
PDX1P52945 MTND4P20-201ENST00000424125 869 ntBASIC3.56□□□□□ -1.84
PDX1P52945 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms