Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 AC231760.1-201ENST00000498002 260 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXA1P49639 AC138853.1-201ENST00000503549 823 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 RPL37P25-201ENST00000507308 276 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 CDC42P4-201ENST00000510507 563 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXA1P49639 PHBP14-201ENST00000512887 367 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA1P49639 RNU6-27P-201ENST00000516146 107 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 AP003122.4-201ENST00000530980 758 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXA1P49639 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXA1P49639 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.46□□□□□ -1.86
HOXA1P49639 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.46□□□□□ -1.86
HOXA1P49639 AC034268.2-201ENST00000571784 482 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC053481.3-201ENST00000577881 843 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC069061.3-201ENST00000582254 823 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA1P49639 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA1P49639 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.46□□□□□ -1.86
HOXA1P49639 TPMTP1-201ENST00000592307 737 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 RPL23AP92-201ENST00000603609 255 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 AC115621.1-201ENST00000604653 858 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC011816.2-201ENST00000607089 556 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 RMST_8.1-201ENST00000610287 165 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 RNVU1-4-201ENST00000612985 164 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AC006338.2-201ENST00000616864 791 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 AP005019.3-201ENST00000620418 560 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA1P49639 MIR7153-201ENST00000637758 57 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA1P49639 AC099654.13-201ENST00000639774 207 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.46□□□□□ -1.86
HOXA1P49639 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.46□□□□□ -1.86
HOXA1P49639 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
HOXA1P49639 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
HOXA1P49639 Y_RNA.234-201ENST00000364409 97 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 RNA5SP87-201ENST00000384155 118 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 RNU6-339P-201ENST00000384310 107 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 RNU6-1207P-201ENST00000384343 107 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 RNU6-517P-201ENST00000384362 110 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 RNU6-878P-201ENST00000384578 110 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 MIR184-201ENST00000384962 84 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC097374.1-203ENST00000400783 485 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL356421.1-201ENST00000403255 413 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 MIR1179-201ENST00000408703 91 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 RNU6-648P-201ENST00000410190 107 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 RPL31P2-201ENST00000413849 377 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
HOXA1P49639 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC005517.2-201ENST00000424673 553 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC104837.2-201ENST00000427236 424 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 USP9YP9-201ENST00000429406 715 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC087650.1-201ENST00000431445 468 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA1P49639 SDCBPP1-201ENST00000440192 890 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 MTCYBP1-201ENST00000454315 1119 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 SUMO2P2-201ENST00000456482 255 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 RPL12P20-201ENST00000475538 479 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC092451.1-201ENST00000480211 153 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 ACTR3P3-201ENST00000480448 893 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC093267.1-201ENST00000489176 961 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC108064.1-201ENST00000513791 460 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AP003181.2-201ENST00000528941 181 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 OR4P1P-201ENST00000530808 1136 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC016957.1-201ENST00000534895 309 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.45□□□□□ -1.86
HOXA1P49639 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC051619.2-201ENST00000559063 397 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC027807.1-201ENST00000559921 996 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.45□□□□□ -1.86
HOXA1P49639 AC137800.2-201ENST00000574375 120 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 HMGN1P30-201ENST00000589286 268 ntBASIC3.45□□□□□ -1.86
HOXA1P49639 AC107304.1-201ENST00000604229 296 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 189.5 ms