Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LHX1P48742 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.64□□□□□ -1.83
LHX1P48742 DHFRP6-201ENST00000401776 268 ntBASIC3.64□□□□□ -1.83
LHX1P48742 Z98941.1-201ENST00000407764 100 ntBASIC3.64□□□□□ -1.83
LHX1P48742 HSFY4P-201ENST00000415994 1181 ntBASIC3.64□□□□□ -1.83
LHX1P48742 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.64□□□□□ -1.83
LHX1P48742 MTCYBP38-201ENST00000417160 1123 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AIMP1P1-201ENST00000418670 937 ntBASIC3.64□□□□□ -1.83
LHX1P48742 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.64□□□□□ -1.83
LHX1P48742 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.64□□□□□ -1.83
LHX1P48742 RSL24D1P3-201ENST00000449255 495 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC3.64□□□□□ -1.83
LHX1P48742 AC008155.2-201ENST00000464337 397 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AP000563.1-201ENST00000490865 758 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AL358832.1-201ENST00000497800 389 ntBASIC3.64□□□□□ -1.83
LHX1P48742 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.64□□□□□ -1.83
LHX1P48742 AC010625.1-201ENST00000511296 403 ntBASIC3.64□□□□□ -1.83
LHX1P48742 RNU6-27P-201ENST00000516146 107 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.64□□□□□ -1.83
LHX1P48742 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.64□□□□□ -1.83
LHX1P48742 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.64□□□□□ -1.83
LHX1P48742 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.64□□□□□ -1.83
LHX1P48742 CYCSP2-201ENST00000558168 301 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.64□□□□□ -1.83
LHX1P48742 SNRPGP15-201ENST00000600149 222 ntBASIC3.64□□□□□ -1.83
LHX1P48742 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.64□□□□□ -1.83
LHX1P48742 AL355493.4-201ENST00000618530 292 ntBASIC3.64□□□□□ -1.83
LHX1P48742 C2orf27A-204ENST00000623058 969 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AP002791.1-201ENST00000623291 381 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AC007490.1-201ENST00000624321 703 ntBASIC3.64□□□□□ -1.83
LHX1P48742 AC138649.5-201ENST00000637456 137 ntBASIC3.64□□□□□ -1.83
LHX1P48742 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
LHX1P48742 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LHX1P48742 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LHX1P48742 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.64□□□□□ -1.83
LHX1P48742 MTND5P1-201ENST00000445440 1375 ntBASIC3.63□□□□□ -1.83
LHX1P48742 MTND4P34-201ENST00000572715 1371 ntBASIC3.63□□□□□ -1.83
LHX1P48742 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LHX1P48742 SNORA4.1-201ENST00000364263 144 ntBASIC3.63□□□□□ -1.83
LHX1P48742 RNU6-335P-201ENST00000364563 113 ntBASIC3.63□□□□□ -1.83
LHX1P48742 RNA5SP267-201ENST00000364893 126 ntBASIC3.63□□□□□ -1.83
LHX1P48742 RNA5SP167-201ENST00000365461 116 ntBASIC3.63□□□□□ -1.83
LHX1P48742 RNVU1-14-201ENST00000384770 164 ntBASIC3.63□□□□□ -1.83
LHX1P48742 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LHX1P48742 PTMAP5-201ENST00000393073 333 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC119751.3-201ENST00000399720 670 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AL583834.1-201ENST00000406943 343 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AL158156.1-201ENST00000422509 473 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AL953862.1-201ENST00000423016 168 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC019178.2-201ENST00000423595 505 ntBASIC3.63□□□□□ -1.83
LHX1P48742 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AC005297.2-201ENST00000450430 606 ntBASIC3.63□□□□□ -1.83
LHX1P48742 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 MTCO3P11-201ENST00000455103 774 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 snoU13.22-201ENST00000459428 104 ntBASIC3.63□□□□□ -1.83
LHX1P48742 RPL23AP67-201ENST00000465341 474 ntBASIC3.63□□□□□ -1.83
LHX1P48742 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 RNU6-150P-201ENST00000516237 95 ntBASIC3.63□□□□□ -1.83
LHX1P48742 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LHX1P48742 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AC022861.1-201ENST00000522981 663 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AP003461.1-201ENST00000528866 78 ntBASIC3.63□□□□□ -1.83
LHX1P48742 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 AC024224.1-201ENST00000538284 609 ntBASIC3.63□□□□□ -1.83
LHX1P48742 EEF1B2P4-201ENST00000551398 348 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.63□□□□□ -1.83
LHX1P48742 MIR4738-201ENST00000579134 87 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC010928.3-201ENST00000587712 541 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.63□□□□□ -1.83
LHX1P48742 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 AL139418.1-201ENST00000613613 177 ntBASIC3.63□□□□□ -1.83
LHX1P48742 AC009464.1-201ENST00000615731 469 ntBASIC3.63□□□□□ -1.83
LHX1P48742 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 AC004009.2-201ENST00000623016 728 ntBASIC3.63□□□□□ -1.83
LHX1P48742 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
LHX1P48742 AC091925.2-201ENST00000625059 256 ntBASIC3.63□□□□□ -1.83
LHX1P48742 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.63□□□□□ -1.83
LHX1P48742 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LHX1P48742 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms