Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.48□□□□□ -1.53
CHRNA4P43681 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
CHRNA4P43681 AC002525.1-201ENST00000624392 1622 ntBASIC5.48□□□□□ -1.53
CHRNA4P43681 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CHRNA4P43681 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
CHRNA4P43681 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
CHRNA4P43681 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 AC020633.1-201ENST00000468439 2247 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 AL161781.1-201ENST00000354277 403 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 SNORD50.1-201ENST00000362987 71 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 RN7SKP124-201ENST00000364730 341 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 Y_RNA.352-201ENST00000365439 102 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 RNY3P13-201ENST00000365542 102 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 RNU6-22P-201ENST00000384355 107 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 Y_RNA.526-201ENST00000384572 110 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 AL133388.1-201ENST00000404509 287 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 RNA5SP178-201ENST00000410380 128 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC096664.2-201ENST00000411843 406 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA4P43681 SRSF1P1-201ENST00000424058 520 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AL391987.1-201ENST00000441025 200 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC114495.1-201ENST00000441274 436 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.47□□□□□ -1.53
CHRNA4P43681 RPS3AP46-201ENST00000448352 682 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA4P43681 AC023141.9-201ENST00000458734 412 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA4P43681 AC026979.1-201ENST00000492525 396 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC105758.1-201ENST00000506038 399 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC093815.1-201ENST00000508637 280 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA4P43681 AC107393.1-201ENST00000512403 346 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 SNORA31.6-201ENST00000516241 130 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 RNU6-346P-201ENST00000516288 111 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 RNU6-897P-201ENST00000517135 105 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 IGKV2D-10-201ENST00000520194 281 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA4P43681 AC087441.2-201ENST00000529141 262 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AP002392.1-201ENST00000537692 208 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA4P43681 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.47□□□□□ -1.53
CHRNA4P43681 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA4P43681 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CHRNA4P43681 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.47□□□□□ -1.53
CHRNA4P43681 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA4P43681 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA4P43681 AL031666.3-201ENST00000609320 1006 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC093799.2-201ENST00000610062 578 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC109309.2-201ENST00000612597 332 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AL159972.1-201ENST00000625150 448 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 U6.114-201ENST00000636407 96 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CHRNA4P43681 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CHRNA4P43681 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CHRNA4P43681 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CHRNA4P43681 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA4P43681 ADAM24P-201ENST00000398655 2101 ntBASIC5.47□□□□□ -1.53
CHRNA4P43681 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.47□□□□□ -1.53
CHRNA4P43681 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.47□□□□□ -1.53
CHRNA4P43681 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
CHRNA4P43681 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 MIR133B-201ENST00000362210 119 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 Y_RNA.83-201ENST00000363005 113 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 RNU6-682P-201ENST00000363843 106 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 U3.11-201ENST00000364476 212 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 RN7SKP69-201ENST00000365390 305 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 DBIP1-201ENST00000401435 260 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 RN7SKP229-201ENST00000410465 302 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 RNU2-25P-201ENST00000411041 191 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 RPL36AP36-201ENST00000418616 301 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 GSTM5P1-201ENST00000434751 660 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.46□□□□□ -1.54
CHRNA4P43681 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 AL136097.1-201ENST00000456945 913 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 AC092754.1-201ENST00000472975 479 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.46□□□□□ -1.54
CHRNA4P43681 RN7SL717P-201ENST00000478343 297 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 RN7SL466P-201ENST00000497546 295 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 AC097486.1-201ENST00000515331 210 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.46□□□□□ -1.54
CHRNA4P43681 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.46□□□□□ -1.54
CHRNA4P43681 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CHRNA4P43681 HMGN2P28-201ENST00000606102 262 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 BX284668.6-201ENST00000606899 438 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 AC005344.1-201ENST00000613391 459 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 AL691477.1-201ENST00000624398 162 ntBASIC5.46□□□□□ -1.54
CHRNA4P43681 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms