Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 TRMT10BP1-201ENST00000519377 943 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD13P35453 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.92□□□□□ -1.78
HOXD13P35453 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD13P35453 AC034105.4-201ENST00000568304 277 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AL353997.4-201ENST00000586196 166 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC067852.3-201ENST00000589177 561 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC020914.6-201ENST00000594327 272 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD13P35453 VN1R92P-201ENST00000598511 928 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC093424.1-201ENST00000604999 338 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.92□□□□□ -1.78
HOXD13P35453 MIR6798-201ENST00000612887 67 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
HOXD13P35453 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD13P35453 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.92□□□□□ -1.78
HOXD13P35453 SGO1P2-201ENST00000429458 1589 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.92□□□□□ -1.78
HOXD13P35453 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HOXD13P35453 AC011477.1-204ENST00000623416 1325 ntBASIC3.92□□□□□ -1.78
HOXD13P35453 AC027290.2-201ENST00000623210 18662 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 AC068647.1-201ENST00000489539 2265 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC007389.2-201ENST00000434630 306 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 MTCYBP45-201ENST00000435243 565 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AL662791.1-201ENST00000441992 928 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC234775.1-201ENST00000454247 670 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 NIPA2P2-201ENST00000496376 1083 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC104685.1-201ENST00000502445 371 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC093677.1-201ENST00000514414 678 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 RN7SKP13-201ENST00000515933 244 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 SNORA31.8-201ENST00000516327 108 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 RNU1-45P-201ENST00000517191 141 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 UBTFL10-201ENST00000528532 562 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AP003461.1-201ENST00000528866 78 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.91□□□□□ -1.78
HOXD13P35453 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC090186.1-201ENST00000605991 572 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AC021755.4-201ENST00000616620 456 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AL357559.1-201ENST00000622228 274 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AL161637.1-201ENST00000622380 412 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC008993.2-201ENST00000631744 806 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 AC103706.2-201ENST00000638080 240 ntBASIC3.91□□□□□ -1.78
HOXD13P35453 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
HOXD13P35453 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.91□□□□□ -1.78
HOXD13P35453 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HOXD13P35453 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
HOXD13P35453 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.9□□□□□ -1.78
HOXD13P35453 FRG1BP-201ENST00000278882 761 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
HOXD13P35453 SNORD113-6-201ENST00000363345 75 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD13P35453 MIR320C1-201ENST00000408566 88 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC006989.1-201ENST00000427212 131 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 CYCSP4-201ENST00000429682 331 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXD13P35453 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD13P35453 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC104619.4-201ENST00000510773 249 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC026333.2-201ENST00000542164 106 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD13P35453 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD13P35453 AC006539.2-201ENST00000601729 572 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 AP001330.4-201ENST00000604350 154 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD13P35453 CR392039.5-201ENST00000623201 510 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 AP000676.4-201ENST00000624659 623 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 AC009093.8-201ENST00000641769 292 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
HOXD13P35453 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.9□□□□□ -1.79
HOXD13P35453 MTCO1P9-201ENST00000505577 1534 ntBASIC3.9□□□□□ -1.79
HOXD13P35453 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
HOXD13P35453 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms