Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 ZNF849P-201ENST00000594711 1566 ntBASIC3.08□□□□□ -1.92
HOXA9P31269 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
HOXA9P31269 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA9P31269 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA9P31269 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA9P31269 NACA3P-201ENST00000359690 648 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 U3.6-201ENST00000363622 211 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 RPL21P3-201ENST00000395517 478 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 RPL7P8-201ENST00000411964 730 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC109780.2-201ENST00000413467 845 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC019097.1-201ENST00000424783 735 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC013262.1-201ENST00000426710 252 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA9P31269 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 HSFY3P-201ENST00000444242 1191 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 RPL36AP33-201ENST00000450395 310 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC146507.2-201ENST00000460608 476 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 RPS4XP6-201ENST00000477670 797 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC093278.1-201ENST00000494700 600 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 RNA5SP380-201ENST00000517190 98 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 RN7SKP283-201ENST00000517197 270 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXA9P31269 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 AC008562.1-201ENST00000521763 330 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC068339.2-201ENST00000534395 618 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC095057.3-201ENST00000567102 1157 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC034268.2-201ENST00000571784 482 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA9P31269 MIR4789-201ENST00000577469 82 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXA9P31269 AP001029.3-201ENST00000588063 596 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC133794.1-201ENST00000602731 914 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AC103881.1-201ENST00000603476 538 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 AL009028.1-201ENST00000604895 802 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA9P31269 AC007318.2-201ENST00000620999 243 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXA9P31269 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 AL355596.1-201ENST00000565399 3996 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HOXA9P31269 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
HOXA9P31269 ANKRD36BP1-201ENST00000358576 1779 ntBASIC3.07□□□□□ -1.92
HOXA9P31269 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
HOXA9P31269 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA9P31269 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA9P31269 FTLP6-201ENST00000355274 422 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 MIR449A-201ENST00000362113 91 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 RNU6-468P-201ENST00000384003 109 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 RNU6-301P-201ENST00000384277 107 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 RNU6-932P-201ENST00000391108 106 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA9P31269 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 AL591034.1-201ENST00000407447 340 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 RNA5SP274-201ENST00000410484 108 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 MTND5P27-201ENST00000428871 1720 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC087499.2-201ENST00000432861 149 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 RPS20P5-201ENST00000434808 360 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 MTND5P24-201ENST00000438892 1767 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA9P31269 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC093801.2-201ENST00000503966 1050 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC117522.3-201ENST00000507974 584 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC019227.1-201ENST00000526902 510 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.06□□□□□ -1.92
HOXA9P31269 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.06□□□□□ -1.92
HOXA9P31269 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC104072.1-201ENST00000568817 668 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.06□□□□□ -1.92
HOXA9P31269 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC068620.3-201ENST00000602749 560 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC073387.2-201ENST00000604797 784 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AL133445.2-201ENST00000611191 527 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC008759.3-201ENST00000613300 508 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC018926.1-201ENST00000616335 435 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA9P31269 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA9P31269 AC093831.2-201ENST00000624393 3427 ntBASIC3.06□□□□□ -1.92
HOXA9P31269 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
HOXA9P31269 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
HOXA9P31269 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
HOXA9P31269 API5P2-201ENST00000397055 1498 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms