Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC010881.1-201ENST00000433830 235 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 RPL23AP58-201ENST00000440453 469 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC025750.2-201ENST00000442609 450 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC003982.1-202ENST00000469928 248 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC010374.2-201ENST00000512933 535 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AL133271.1-201ENST00000538229 291 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC125611.2-201ENST00000551907 647 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AL355812.1-201ENST00000603215 216 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC128687.1-201ENST00000605304 619 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC013468.1-201ENST00000608680 598 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC090115.4-201ENST00000609970 188 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 MIR7106-201ENST00000612419 65 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AL355810.1-201ENST00000614629 552 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC025016.1-201ENST00000616746 682 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 CYCSP41-201ENST00000616920 296 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC002076.2-201ENST00000617362 122 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 Z99129.2-201ENST00000619967 314 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AP003122.6-201ENST00000623831 495 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AP003400.6-201ENST00000624698 740 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC068620.4-201ENST00000636730 1182 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 AP003122.5-201ENST00000527668 3766 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
HLA-DMBP28068 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.15□□□□□ -2.07
HLA-DMBP28068 SGO1P2-201ENST00000429458 1589 ntBASIC2.15□□□□□ -2.07
HLA-DMBP28068 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 RNU6-252P-201ENST00000363232 107 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 RNU6-1249P-201ENST00000363237 111 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DMBP28068 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
HLA-DMBP28068 RNA5SP38-201ENST00000410750 119 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 EEF1A1P41-201ENST00000414667 207 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 BX682237.1-201ENST00000415016 335 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 RPS27P23-201ENST00000487608 251 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 OR9N1P-202ENST00000494289 481 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 ELOCP31-201ENST00000540463 467 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 AL391156.1-201ENST00000554965 554 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 AL137843.1-201ENST00000605078 385 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 AC090617.9-201ENST00000623751 147 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 AC079228.1-201ENST00000624774 1049 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 AC091564.4-201ENST00000533934 2194 ntBASIC2.14□□□□□ -2.07
HLA-DMBP28068 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
HLA-DMBP28068 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DMBP28068 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC006378.2-201ENST00000623178 2476 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DMBP28068 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DMBP28068 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DMBP28068 RNU6-1339P-201ENST00000363574 91 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 ATP5F1P6-201ENST00000402768 767 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AL096701.2-201ENST00000416920 238 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 FNDC3CP-201ENST00000420795 1155 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 RPL36AP6-201ENST00000435770 321 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 MTCYBP34-201ENST00000439552 670 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 Z96811.1-201ENST00000445880 108 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 NIPA2P5-201ENST00000452282 464 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC103975.1-201ENST00000482506 483 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC096576.1-201ENST00000489014 359 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 OR52A4P-203ENST00000498233 1014 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC096751.1-202ENST00000502691 1067 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC083906.5-201ENST00000503722 328 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC097462.2-201ENST00000504623 481 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC2.13□□□□□ -2.07
HLA-DMBP28068 AC091826.1-201ENST00000514065 313 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 MTND5P4-201ENST00000514978 288 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 SNORA31.8-201ENST00000516327 108 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 ERHP1-201ENST00000523006 310 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 AP000857.1-201ENST00000532151 543 ntBASIC2.13□□□□□ -2.07
HLA-DMBP28068 OSBPL9P3-201ENST00000534523 595 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms