Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTA1P02549 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.94□□□□□ -2.1
SPTA1P02549 AC093591.3-201ENST00000634516 308 ntBASIC1.94□□□□□ -2.1
SPTA1P02549 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SPTA1P02549 AC095050.2-201ENST00000510748 1458 ntBASIC1.94□□□□□ -2.1
SPTA1P02549 NR1H5P-201ENST00000452683 1377 ntBASIC1.94□□□□□ -2.1
SPTA1P02549 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTA1P02549 AC009238.1-201ENST00000442165 424 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AC009237.6-201ENST00000446969 424 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTA1P02549 AC093767.1-201ENST00000504523 156 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 NAMPTP2-201ENST00000505629 1115 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTA1P02549 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTA1P02549 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTA1P02549 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTA1P02549 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
SPTA1P02549 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTA1P02549 MIR21-201ENST00000362134 72 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 RNA5SP456-201ENST00000364002 114 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 FO393414.1-201ENST00000428697 1184 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AL118520.1-201ENST00000450770 291 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTA1P02549 AC017007.3-201ENST00000479865 435 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AC092185.1-201ENST00000491371 97 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.93□□□□□ -2.1
SPTA1P02549 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC1.93□□□□□ -2.1
SPTA1P02549 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTA1P02549 AMZ2P1-203ENST00000565833 850 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.93□□□□□ -2.1
SPTA1P02549 AC120053.1-201ENST00000607706 736 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AL451074.6-201ENST00000608512 729 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 AC016590.3-201ENST00000611171 753 ntBASIC1.93□□□□□ -2.1
SPTA1P02549 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPTA1P02549 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.93□□□□□ -2.1
SPTA1P02549 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTA1P02549 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTA1P02549 RNA5SP37-201ENST00000365420 130 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTA1P02549 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTA1P02549 RNA5SP61-201ENST00000516453 100 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 OR4H12P-201ENST00000556269 907 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AGGF1P8-201ENST00000562979 1000 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AC025281.1-201ENST00000567026 265 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.92□□□□□ -2.1
SPTA1P02549 WISP1-OT1-201ENST00000602893 642 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 GTF2H2B-203ENST00000508065 1432 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AC011978.2-201ENST00000569835 2054 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTA1P02549 RNU6ATAC40P-201ENST00000408580 137 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 RNU7-170P-201ENST00000459303 61 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AC011352.3-201ENST00000505162 593 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 RNA5SP200-201ENST00000516360 103 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 snoZ278.1-201ENST00000517059 112 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 RNU6-1231P-201ENST00000517185 103 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTA1P02549 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.92□□□□□ -2.1
SPTA1P02549 RPAP2P1-201ENST00000603626 1168 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 HMGN2P28-201ENST00000606102 262 ntBASIC1.92□□□□□ -2.1
SPTA1P02549 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPTA1P02549 AL021407.1-201ENST00000404531 386 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 SDCBPP3-201ENST00000419629 891 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AL358075.3-201ENST00000426289 226 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.91□□□□□ -2.1
SPTA1P02549 RPS7P5-201ENST00000441482 581 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 HMGB3P8-201ENST00000449709 577 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 RPS15AP17-201ENST00000470598 390 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTA1P02549 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SPTA1P02549 DNAJC19P9-201ENST00000555084 351 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC002076.2-201ENST00000617362 122 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC025048.6-202ENST00000627667 438 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.91□□□□□ -2.1
SPTA1P02549 AC116158.1-201ENST00000560231 2129 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPTA1P02549 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SPTA1P02549 MIR142-201ENST00000384835 87 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.91□□□□□ -2.1
SPTA1P02549 AC073136.2-201ENST00000417282 849 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.91□□□□□ -2.1
SPTA1P02549 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTA1P02549 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC009969.1-201ENST00000438726 172 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC1.91□□□□□ -2.1
SPTA1P02549 AC009237.8-201ENST00000445492 379 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.91□□□□□ -2.1
SPTA1P02549 TOMM22P6-201ENST00000465035 409 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 OR52A4P-203ENST00000498233 1014 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.91□□□□□ -2.1
SPTA1P02549 AC119751.1-201ENST00000513357 765 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 RNA5SP182-201ENST00000516064 82 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC1.91□□□□□ -2.1
SPTA1P02549 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTA1P02549 AC005951.1-201ENST00000576706 485 ntBASIC1.91□□□□□ -2.1
SPTA1P02549 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.91□□□□□ -2.1
SPTA1P02549 MIR6132-201ENST00000622083 109 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms