Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 Mico1.1-201ENST00000611698 204 ntBASIC3.8□□□□□ -1.8
HLA-DQA2P01906 MIR6780A-201ENST00000615089 68 ntBASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AL158196.1-201ENST00000616786 434 ntBASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AC022893.2-201ENST00000564832 3296 ntBASIC3.8□□□□□ -1.8
HLA-DQA2P01906 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 AL592182.3-201ENST00000642132 3304 ntBASIC3.8□□□□□ -1.8
HLA-DQA2P01906 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
HLA-DQA2P01906 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 OR56B2P-202ENST00000641377 2453 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MIR448-201ENST00000362131 111 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MIR19A-201ENST00000384878 82 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 RNA5SP332-201ENST00000391063 115 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MIR1179-201ENST00000408703 91 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 SSXP9-201ENST00000417503 292 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL356387.2-201ENST00000422272 243 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 USP9YP15-201ENST00000442391 422 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AC010655.1-201ENST00000449336 292 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 FABP3P2-201ENST00000453169 399 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 RN7SL585P-201ENST00000470538 280 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 RPS29P19-201ENST00000479709 171 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 RPL9P6-201ENST00000492764 598 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL117351.2-201ENST00000513571 157 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 RNU6-1095P-201ENST00000516148 108 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 RN7SKP92-201ENST00000517266 244 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AF186190.1-201ENST00000517470 480 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MTND1P5-201ENST00000517906 940 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MTCO2P4-201ENST00000517968 247 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MIR3146-201ENST00000580367 79 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 MIR7702-201ENST00000621931 59 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 SEPT14P19-203ENST00000633205 211 ntBASIC3.79□□□□□ -1.8
HLA-DQA2P01906 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
HLA-DQA2P01906 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AP001486.2-201ENST00000561652 5113 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 Y_RNA.296-201ENST00000364930 108 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 MIR135A2-201ENST00000384854 100 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AL133270.1-201ENST00000402635 279 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 SNORA11F-201ENST00000408237 128 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC244098.2-201ENST00000422068 99 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 RPEP3-201ENST00000425462 676 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AL451074.3-201ENST00000437709 472 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 RPS17P13-201ENST00000448974 407 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC079448.1-201ENST00000449377 373 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC234775.1-201ENST00000454247 670 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 RBM43P1-201ENST00000476891 1081 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 RPS3AP50-201ENST00000487064 803 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AF213884.2-201ENST00000510417 903 ntBASIC3.78□□□□□ -1.8
HLA-DQA2P01906 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.78□□□□□ -1.8
HLA-DQA2P01906 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 155.8 ms