Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFBP01127 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 AL132857.1-201ENST00000555180 708 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.5□□□□□ -1.85
PDGFBP01127 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 AC023813.2-201ENST00000564321 469 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AC087481.2-201ENST00000565492 330 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 MTND1P8-201ENST00000571424 950 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 RPL23AP92-201ENST00000603609 255 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.5□□□□□ -1.85
PDGFBP01127 AL390240.1-201ENST00000612950 384 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 PLCE1P1-201ENST00000622094 305 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AP003355.3-201ENST00000623465 114 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 AC090772.4-201ENST00000623599 362 ntBASIC3.5□□□□□ -1.85
PDGFBP01127 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
PDGFBP01127 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFBP01127 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.5□□□□□ -1.85
PDGFBP01127 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.5□□□□□ -1.85
PDGFBP01127 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFBP01127 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PDGFBP01127 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 UBE3AP2-201ENST00000429033 2259 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 FAM35DP-201ENST00000323387 2712 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFBP01127 RPL7P26-201ENST00000333817 754 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 OR5H2-201ENST00000355273 945 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
PDGFBP01127 RNU6-707P-201ENST00000364647 95 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 RNU6-1242P-201ENST00000391052 103 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 MTCO1P56-201ENST00000401674 224 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 CYCSP45-201ENST00000402289 315 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFBP01127 AC012065.2-201ENST00000421295 375 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 RPL35AP12-201ENST00000425362 338 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 NANOGP2-201ENST00000435391 727 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFBP01127 EEF1A1P39-201ENST00000440791 250 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC112492.1-201ENST00000449607 712 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC079776.3-201ENST00000450665 370 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 SLC31A1P1-201ENST00000451221 567 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 RPL7P38-201ENST00000488396 739 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 RPL21P131-201ENST00000497298 483 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC010625.1-201ENST00000511296 403 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFBP01127 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFBP01127 AC026801.2-201ENST00000515352 425 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFBP01127 HIGD1AP10-201ENST00000527837 282 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFBP01127 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.49□□□□□ -1.85
PDGFBP01127 AL389895.1-201ENST00000554127 252 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFBP01127 MIR4474-201ENST00000579189 78 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.49□□□□□ -1.85
PDGFBP01127 VN1R83P-201ENST00000595685 445 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 BNIP3P10-201ENST00000605360 577 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.49□□□□□ -1.85
PDGFBP01127 AC006386.1-201ENST00000619436 415 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 AC127502.3-201ENST00000636170 1206 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 MAPK10-373ENST00000641983 6772 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 MTCO1P23-201ENST00000415223 1526 ntBASIC3.49□□□□□ -1.85
PDGFBP01127 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.49□□□□□ -1.85
PDGFBP01127 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PDGFBP01127 AC010733.2-201ENST00000589496 5702 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 RNU4-68P-201ENST00000364314 141 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 RNU1-140P-201ENST00000365040 165 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 MIR506-201ENST00000384998 124 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 RNU2-42P-201ENST00000410697 113 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 HMGN1P24-201ENST00000412282 298 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PDGFBP01127 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 SSR1P2-201ENST00000415208 787 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 RPS3AP37-201ENST00000419176 745 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 RPL21P109-201ENST00000422213 475 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 USP9YP24-201ENST00000434374 697 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 USP9YP17-201ENST00000444617 696 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC3.48□□□□□ -1.85
PDGFBP01127 WDR78-207ENST00000488333 613 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 OR4G11P-201ENST00000492842 939 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 NIPA2P2-201ENST00000496376 1083 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.48□□□□□ -1.85
PDGFBP01127 MLLT10P2-201ENST00000506434 249 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.48□□□□□ -1.85
PDGFBP01127 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.48□□□□□ -1.85
PDGFBP01127 OR4P1P-201ENST00000530808 1136 ntBASIC3.48□□□□□ -1.85
PDGFBP01127 AC126177.3-201ENST00000551839 688 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms