Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PRDX3P3-201ENST00000447765 522 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.22□□□□□ -1.73
MBD4O95243 HMGB1P15-201ENST00000453854 435 ntBASIC4.22□□□□□ -1.73
MBD4O95243 ANP32BP2-201ENST00000454525 545 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.22□□□□□ -1.73
MBD4O95243 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC4.22□□□□□ -1.73
MBD4O95243 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.22□□□□□ -1.73
MBD4O95243 AC096751.1-202ENST00000502691 1067 ntBASIC4.22□□□□□ -1.73
MBD4O95243 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.22□□□□□ -1.73
MBD4O95243 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.22□□□□□ -1.73
MBD4O95243 RNU6-150P-201ENST00000516237 95 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.22□□□□□ -1.73
MBD4O95243 OR5AP1P-201ENST00000529730 940 ntBASIC4.22□□□□□ -1.73
MBD4O95243 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.22□□□□□ -1.73
MBD4O95243 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.22□□□□□ -1.73
MBD4O95243 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.22□□□□□ -1.73
MBD4O95243 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.22□□□□□ -1.73
MBD4O95243 AC013244.3-201ENST00000605614 388 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AL390208.1-201ENST00000605885 644 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AC090425.2-201ENST00000608818 501 ntBASIC4.22□□□□□ -1.73
MBD4O95243 TUSC7.1-201ENST00000610969 165 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AC012531.5-201ENST00000611375 151 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AL590240.3-201ENST00000621416 943 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AL445264.1-201ENST00000621719 171 ntBASIC4.22□□□□□ -1.73
MBD4O95243 RBM12B-AS1-201ENST00000623283 653 ntBASIC4.22□□□□□ -1.73
MBD4O95243 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
MBD4O95243 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MBD4O95243 AC066616.2-201ENST00000559334 1481 ntBASIC4.22□□□□□ -1.73
MBD4O95243 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
MBD4O95243 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
MBD4O95243 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
MBD4O95243 AL022578.1-201ENST00000439330 1433 ntBASIC4.21□□□□□ -1.73
MBD4O95243 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
MBD4O95243 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 SNORD17-201ENST00000390930 237 ntBASIC4.21□□□□□ -1.74
MBD4O95243 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.21□□□□□ -1.74
MBD4O95243 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 AL008987.1-201ENST00000415528 237 ntBASIC4.21□□□□□ -1.74
MBD4O95243 XKRYP1-201ENST00000423438 492 ntBASIC4.21□□□□□ -1.74
MBD4O95243 DUTP6-201ENST00000425573 462 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC017083.1-201ENST00000428093 483 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC4.21□□□□□ -1.74
MBD4O95243 XKRYP2-201ENST00000432915 492 ntBASIC4.21□□□□□ -1.74
MBD4O95243 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC4.21□□□□□ -1.74
MBD4O95243 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 SNRPEP7-201ENST00000438350 220 ntBASIC4.21□□□□□ -1.74
MBD4O95243 MTCYBP31-201ENST00000438855 1122 ntBASIC4.21□□□□□ -1.74
MBD4O95243 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC4.21□□□□□ -1.74
MBD4O95243 RPL7P52-201ENST00000449200 742 ntBASIC4.21□□□□□ -1.74
MBD4O95243 RSL24D1P3-201ENST00000449255 495 ntBASIC4.21□□□□□ -1.74
MBD4O95243 HMGN2P7-201ENST00000456186 273 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC4.21□□□□□ -1.74
MBD4O95243 AC093278.1-201ENST00000494700 600 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 PDCL2P2-201ENST00000533651 189 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.21□□□□□ -1.74
MBD4O95243 AL031176.1-201ENST00000604554 466 ntBASIC4.21□□□□□ -1.74
MBD4O95243 MIR7851-201ENST00000610611 160 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC011330.2-201ENST00000621680 635 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.21□□□□□ -1.74
MBD4O95243 AL645937.1-201ENST00000641739 1652 ntBASIC4.21□□□□□ -1.74
MBD4O95243 EXOC5P1-201ENST00000510543 1969 ntBASIC4.21□□□□□ -1.74
MBD4O95243 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.21□□□□□ -1.74
MBD4O95243 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
MBD4O95243 TNPO1P3-201ENST00000436471 2662 ntBASIC4.2□□□□□ -1.74
MBD4O95243 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 CR381670.1-201ENST00000624291 1693 ntBASIC4.2□□□□□ -1.74
MBD4O95243 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 TRBV24OR9-2-201ENST00000416632 435 ntBASIC4.2□□□□□ -1.74
MBD4O95243 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 PTP4A1P5-201ENST00000420305 455 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD4O95243 ZYG11AP1-201ENST00000430329 837 ntBASIC4.2□□□□□ -1.74
MBD4O95243 MTND1P32-201ENST00000433043 938 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.2□□□□□ -1.74
MBD4O95243 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.2□□□□□ -1.74
MBD4O95243 AL353691.1-201ENST00000451332 387 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD4O95243 RNU7-170P-201ENST00000459303 61 ntBASIC4.2□□□□□ -1.74
MBD4O95243 MEMO1P3-201ENST00000459811 302 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC008155.2-201ENST00000464337 397 ntBASIC4.2□□□□□ -1.74
MBD4O95243 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.2□□□□□ -1.74
MBD4O95243 RPL31P50-201ENST00000471002 296 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
MBD4O95243 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.2□□□□□ -1.74
MBD4O95243 MLLT10P2-201ENST00000506434 249 ntBASIC4.2□□□□□ -1.74
MBD4O95243 AC093281.2-201ENST00000510153 597 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms