Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 AC244505.5-201ENST00000443639 207 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 Z95327.1-201ENST00000446082 482 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.66□□□□□ -1.82
ZIC3O60481 snoU109.4-201ENST00000458953 143 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 snoU109.1-201ENST00000459339 135 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 snoU13.3-201ENST00000459441 104 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 ACTR3P3-201ENST00000480448 893 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 DUXAP2-201ENST00000519198 589 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AP003467.2-201ENST00000520175 319 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.66□□□□□ -1.82
ZIC3O60481 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.66□□□□□ -1.82
ZIC3O60481 AP003392.2-201ENST00000527269 208 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AP003122.4-201ENST00000530980 758 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.66□□□□□ -1.82
ZIC3O60481 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.66□□□□□ -1.82
ZIC3O60481 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC3.66□□□□□ -1.82
ZIC3O60481 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 LLPHP1-201ENST00000603571 367 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.66□□□□□ -1.82
ZIC3O60481 AL365503.1-201ENST00000605247 905 ntBASIC3.66□□□□□ -1.82
ZIC3O60481 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 FTO-223ENST00000640179 210 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
ZIC3O60481 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.66□□□□□ -1.82
ZIC3O60481 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
ZIC3O60481 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
ZIC3O60481 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
ZIC3O60481 Z82217.1-201ENST00000625157 8149 ntBASIC3.65□□□□□ -1.82
ZIC3O60481 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.65□□□□□ -1.83
ZIC3O60481 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.65□□□□□ -1.83
ZIC3O60481 RNU6-356P-201ENST00000384140 107 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RNU6-821P-201ENST00000390995 107 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 AL359704.1-201ENST00000411586 781 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RPS3AP3-201ENST00000411933 242 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AF274854.1-201ENST00000413236 615 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC245052.5-201ENST00000416320 649 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 USP9YP28-201ENST00000435142 589 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 TBCAP1-201ENST00000436520 327 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 MTND6P13-201ENST00000443510 523 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 RPL21P89-201ENST00000444021 467 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 RPS11P1-201ENST00000451072 473 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.65□□□□□ -1.83
ZIC3O60481 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 RN7SL271P-201ENST00000487601 295 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RPL37P25-201ENST00000507308 276 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC017037.1-201ENST00000508460 471 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 FTH1P21-201ENST00000512179 511 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RN7SKP298-201ENST00000515950 94 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RNU4-60P-201ENST00000517239 135 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AP003497.1-201ENST00000528472 562 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.65□□□□□ -1.83
ZIC3O60481 SETP7-201ENST00000552169 453 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 RPL21P5-201ENST00000554662 472 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.65□□□□□ -1.83
ZIC3O60481 AC107954.1-201ENST00000565906 727 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.65□□□□□ -1.83
ZIC3O60481 AC034268.2-201ENST00000571784 482 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.65□□□□□ -1.83
ZIC3O60481 AL451044.1-201ENST00000604867 238 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC109347.2-201ENST00000610220 349 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 AC024941.1-201ENST00000612250 334 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AC008250.2-201ENST00000615261 205 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 AP001506.1-201ENST00000615444 211 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.65□□□□□ -1.83
ZIC3O60481 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.65□□□□□ -1.83
ZIC3O60481 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.83
ZIC3O60481 AC092447.7-201ENST00000422212 1621 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 MTND5P33-201ENST00000571250 1450 ntBASIC3.65□□□□□ -1.83
ZIC3O60481 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.64□□□□□ -1.83
ZIC3O60481 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.64□□□□□ -1.83
ZIC3O60481 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
ZIC3O60481 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms