Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 TRBV26-201ENST00000456572 344 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 BX510359.1-201ENST00000456973 237 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.63□□□□□ -1.99
SGCEO43556 MTND5P4-201ENST00000514978 288 ntBASIC2.63□□□□□ -1.99
SGCEO43556 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.63□□□□□ -1.99
SGCEO43556 PRELID3BP4-201ENST00000515476 571 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AP000790.1-201ENST00000528891 737 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AC124293.1-201ENST00000530034 493 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.63□□□□□ -1.99
SGCEO43556 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 NUTF2P8-201ENST00000604593 363 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AC106900.2-201ENST00000604994 317 ntBASIC2.63□□□□□ -1.99
SGCEO43556 AC055876.5-201ENST00000605667 259 ntBASIC2.63□□□□□ -1.99
SGCEO43556 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SGCEO43556 AC004777.1-201ENST00000624317 287 ntBASIC2.63□□□□□ -1.99
SGCEO43556 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SGCEO43556 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SGCEO43556 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.62□□□□□ -1.99
SGCEO43556 RNA5SP139-201ENST00000364340 117 ntBASIC2.62□□□□□ -1.99
SGCEO43556 SNORA71.1-201ENST00000364523 117 ntBASIC2.62□□□□□ -1.99
SGCEO43556 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SGCEO43556 RNU6-1005P-201ENST00000384519 107 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AL023807.1-201ENST00000407932 359 ntBASIC2.62□□□□□ -1.99
SGCEO43556 RN7SKP220-201ENST00000410611 288 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.62□□□□□ -1.99
SGCEO43556 CR848007.2-201ENST00000424918 787 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AL009174.1-201ENST00000426577 416 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC079780.1-201ENST00000428259 207 ntBASIC2.62□□□□□ -1.99
SGCEO43556 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.62□□□□□ -1.99
SGCEO43556 MUPP-201ENST00000438111 566 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC104978.1-201ENST00000449387 391 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.62□□□□□ -1.99
SGCEO43556 OR2A20P-203ENST00000498397 1268 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.62□□□□□ -1.99
SGCEO43556 AC008885.1-201ENST00000514930 301 ntBASIC2.62□□□□□ -1.99
SGCEO43556 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SGCEO43556 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC2.62□□□□□ -1.99
SGCEO43556 IGJP1-201ENST00000522682 475 ntBASIC2.62□□□□□ -1.99
SGCEO43556 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SGCEO43556 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.62□□□□□ -1.99
SGCEO43556 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.62□□□□□ -1.99
SGCEO43556 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.62□□□□□ -1.99
SGCEO43556 YPEL5P2-201ENST00000605553 359 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AL392048.1-201ENST00000613946 534 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC007318.2-201ENST00000620999 243 ntBASIC2.62□□□□□ -1.99
SGCEO43556 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.62□□□□□ -1.99
SGCEO43556 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.61□□□□□ -1.99
SGCEO43556 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 RNU6-173P-201ENST00000364215 104 ntBASIC2.61□□□□□ -1.99
SGCEO43556 SNORA54-201ENST00000384281 123 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AL356057.1-202ENST00000402263 756 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AL121978.1-201ENST00000402778 359 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AL139095.1-201ENST00000404326 391 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AC009237.2-201ENST00000421358 284 ntBASIC2.61□□□□□ -1.99
SGCEO43556 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SGCEO43556 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 UBBP3-201ENST00000445497 241 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 RPL27AP5-201ENST00000469428 449 ntBASIC2.61□□□□□ -1.99
SGCEO43556 RPS29P2-201ENST00000479278 136 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
SGCEO43556 RPL7P23-201ENST00000493874 747 ntBASIC2.61□□□□□ -1.99
SGCEO43556 RPL21P131-201ENST00000497298 483 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.61□□□□□ -1.99
SGCEO43556 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.61□□□□□ -1.99
SGCEO43556 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 PSMA2P1-201ENST00000526365 646 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AHI1-217ENST00000534469 680 ntTSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 AC090695.1-201ENST00000561269 1222 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.61□□□□□ -1.99
SGCEO43556 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.61□□□□□ -1.99
SGCEO43556 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 BNIP3P11-201ENST00000603878 563 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AC124312.4-201ENST00000605533 310 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AL163051.2-201ENST00000618976 735 ntBASIC2.61□□□□□ -1.99
SGCEO43556 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 AC040168.1-201ENST00000623594 991 ntBASIC2.61□□□□□ -1.99
SGCEO43556 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.61□□□□□ -1.99
SGCEO43556 Z82195.2-201ENST00000612348 18351 ntBASIC2.61□□□□□ -1.99
SGCEO43556 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SGCEO43556 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
SGCEO43556 SNORD46.1-201ENST00000364139 104 ntBASIC2.6□□□□□ -1.99
SGCEO43556 RNA5SP252-201ENST00000391131 119 ntBASIC2.6□□□□□ -1.99
SGCEO43556 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.6□□□□□ -1.99
SGCEO43556 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.6□□□□□ -1.99
SGCEO43556 MTCO1P39-201ENST00000426148 480 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AL451062.2-201ENST00000427515 271 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AL512649.1-201ENST00000428997 581 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms