Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 NECAP1P2-201ENST00000455668 727 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.53□□□□□ -1.68
NPHP1O15259 RNU7-136P-201ENST00000458819 69 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 SNORD11.1-201ENST00000459482 85 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.53□□□□□ -1.68
NPHP1O15259 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.53□□□□□ -1.68
NPHP1O15259 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 HMGB3P15-201ENST00000507326 574 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AC004062.1-201ENST00000509926 645 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.53□□□□□ -1.68
NPHP1O15259 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.53□□□□□ -1.68
NPHP1O15259 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.53□□□□□ -1.68
NPHP1O15259 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC4.53□□□□□ -1.68
NPHP1O15259 AC010198.2-201ENST00000550612 259 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 CYCSP2-201ENST00000558168 301 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC4.53□□□□□ -1.68
NPHP1O15259 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.53□□□□□ -1.68
NPHP1O15259 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.53□□□□□ -1.68
NPHP1O15259 U4.6-201ENST00000621618 127 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 AC006927.4-201ENST00000639187 543 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
NPHP1O15259 OR4G11P-202ENST00000642116 1414 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
NPHP1O15259 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.53□□□□□ -1.68
NPHP1O15259 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
NPHP1O15259 UBE3AP2-201ENST00000429033 2259 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
NPHP1O15259 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
NPHP1O15259 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
NPHP1O15259 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPHP1O15259 CYCSP45-201ENST00000402289 315 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 TPMTP2-201ENST00000414372 726 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 HMGB3P20-201ENST00000417997 600 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 AC017083.1-201ENST00000428093 483 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC005326.1-201ENST00000429197 123 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC087650.1-201ENST00000431445 468 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 RPS25P9-201ENST00000435591 252 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 HMGB1P15-201ENST00000453854 435 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 HMGN2P16-201ENST00000456802 261 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 SNRPGP3-201ENST00000469405 227 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 RPS4XP13-201ENST00000483219 789 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC108729.1-201ENST00000487812 947 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 AC023424.2-201ENST00000493479 777 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC091951.3-201ENST00000504093 246 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC104090.1-201ENST00000506341 1171 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.52□□□□□ -1.69
NPHP1O15259 AC021146.1-201ENST00000511202 716 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 NARSP2-201ENST00000518524 679 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.52□□□□□ -1.69
NPHP1O15259 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.52□□□□□ -1.69
NPHP1O15259 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.52□□□□□ -1.69
NPHP1O15259 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC4.52□□□□□ -1.69
NPHP1O15259 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.52□□□□□ -1.69
NPHP1O15259 MIR4760-201ENST00000585040 80 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AC006270.3-201ENST00000605967 1036 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 AP003392.5-201ENST00000607857 415 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPHP1O15259 AL356473.1-201ENST00000406203 1408 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
NPHP1O15259 AC093010.3-201ENST00000570269 15214 ntBASIC4.52□□□□□ -1.69
NPHP1O15259 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.51□□□□□ -1.69
NPHP1O15259 RPL23AP57-201ENST00000332361 466 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 RNU6-83P-201ENST00000384568 112 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 DUTP6-201ENST00000425573 462 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 AC079780.1-201ENST00000428259 207 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 MUPP-201ENST00000438111 566 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 AL353691.1-201ENST00000451332 387 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 AC098824.1-201ENST00000453565 980 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 MTCO3P11-201ENST00000455103 774 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 snoU13.4-201ENST00000458916 104 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 RPL7P18-201ENST00000478965 734 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.51□□□□□ -1.69
NPHP1O15259 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC4.51□□□□□ -1.69
NPHP1O15259 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.51□□□□□ -1.69
NPHP1O15259 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.51□□□□□ -1.69
NPHP1O15259 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.51□□□□□ -1.69
NPHP1O15259 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
NPHP1O15259 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.51□□□□□ -1.69
NPHP1O15259 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.51□□□□□ -1.69
NPHP1O15259 AC006077.1-201ENST00000604746 343 ntBASIC4.51□□□□□ -1.69
NPHP1O15259 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC4.51□□□□□ -1.69
NPHP1O15259 AC092106.3-201ENST00000611308 722 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms