Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 RPL9P7-201ENST00000330965 580 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 MIR22-201ENST00000362190 85 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 MIR525-201ENST00000384978 85 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 MTND4P13-201ENST00000402078 1023 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 OR51A3P-201ENST00000413596 924 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL136133.1-201ENST00000413694 376 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 MTATP6P20-201ENST00000414147 562 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL161449.1-201ENST00000414531 1199 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 TRIAP1P1-201ENST00000427062 225 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC093155.1-201ENST00000440164 826 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 EEF1A1P39-201ENST00000440791 250 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL592437.1-201ENST00000443781 492 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC093755.1-201ENST00000512950 1023 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC005412.1-201ENST00000580812 1049 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 MAGOH2P-202ENST00000584384 429 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC012468.1-201ENST00000604888 430 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AP004247.3-201ENST00000608682 624 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC107075.1-201ENST00000613695 314 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 MIR6864-201ENST00000617935 70 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AL355493.4-201ENST00000618530 292 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 PLCE1P1-201ENST00000622094 305 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AP000770.2-201ENST00000623694 100 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 AC025263.3-201ENST00000622965 1396 ntBASIC2.96□□□□□ -1.94
TRIM49D1C9J1S8 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 ANKRD36P1-201ENST00000344424 659 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 RNU1-35P-201ENST00000362782 153 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 SNORA7.2-201ENST00000364446 145 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-657P-201ENST00000383904 107 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 MIR217-201ENST00000384817 110 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 MIR34B-201ENST00000385076 84 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 MIR16-1-201ENST00000385271 89 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 SNORD65.1-201ENST00000390889 71 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 PRRC2CP1-201ENST00000404428 159 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 RNU4-47P-201ENST00000410876 114 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC005300.1-201ENST00000428401 373 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC010881.1-201ENST00000433830 235 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 USP9YP24-201ENST00000434374 697 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 MTCO2P20-201ENST00000437339 673 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 USP9YP17-201ENST00000444617 696 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 PTENP1-201ENST00000447117 1215 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 NECAP1P2-201ENST00000455668 727 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 RPL37P3-201ENST00000456825 293 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC096992.1-201ENST00000459808 709 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC104689.1-201ENST00000473356 768 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC126121.1-201ENST00000482313 553 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 DYNLL1P6-201ENST00000503440 264 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 WBP1LP4-201ENST00000505043 344 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 COX6B1P6-201ENST00000522347 255 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC124293.1-201ENST00000530034 493 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AP001542.2-201ENST00000593141 364 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 VN1R88P-201ENST00000596787 292 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC234772.3-201ENST00000602277 528 ntBASIC2.95□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms