Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC1.71□□□□□ -2.14
COL6A5A8TX70 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
COL6A5A8TX70 SNORA51.12-201ENST00000384448 134 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 RN7SKP285-201ENST00000410137 318 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL590399.6-201ENST00000446396 307 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 VN1R17P-201ENST00000472048 1090 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AP004217.1-201ENST00000480579 346 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC021146.5-201ENST00000503544 545 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 snoZ278.1-201ENST00000517059 112 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC068339.2-201ENST00000534395 618 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL020991.1-201ENST00000612314 373 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC095050.2-201ENST00000510748 1458 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 MTCO1P4-201ENST00000520516 1409 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A5A8TX70 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 Y_RNA.354-201ENST00000365448 111 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 SNORA70.7-201ENST00000384159 133 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL162578.1-201ENST00000406202 378 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 SRIP3-201ENST00000413200 219 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 RPL7P46-201ENST00000425129 740 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 SULT1C2P1-202ENST00000562418 459 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A5A8TX70 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 MIR221-201ENST00000385135 110 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL355379.1-201ENST00000405542 640 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL512430.2-201ENST00000406786 339 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A5A8TX70 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
COL6A5A8TX70 MIR4303-201ENST00000581299 66 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC1.7□□□□□ -2.14
COL6A5A8TX70 AL356280.1-201ENST00000603614 379 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC103710.1-201ENST00000610003 901 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 AC008121.2-201ENST00000614647 523 ntBASIC1.7□□□□□ -2.14
COL6A5A8TX70 RNU1-100P-201ENST00000365255 165 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 AL021407.1-201ENST00000404531 386 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A5A8TX70 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 AL137159.1-201ENST00000452808 512 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 RNU7-95P-201ENST00000459222 64 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 NAMPTP2-201ENST00000505629 1115 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 GOLGA5P1-201ENST00000507317 980 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 DNAJC19P9-201ENST00000555084 351 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 AL445437.1-201ENST00000623157 3087 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A5A8TX70 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
COL6A5A8TX70 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 SNORA51.11-201ENST00000384442 131 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 RNU4-74P-201ENST00000411280 161 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 AC244033.1-201ENST00000426826 870 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 HMGB3P8-201ENST00000449709 577 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 RNA5SP380-201ENST00000517190 98 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 AMZ2P1-203ENST00000565833 850 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 WISP1-OT1-201ENST00000602893 642 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 HMGN2P28-201ENST00000606102 262 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.69□□□□□ -2.14
COL6A5A8TX70 MIR6766-201ENST00000622641 72 ntBASIC1.69□□□□□ -2.14
COL6A5A8TX70 RNA5SP383-201ENST00000362934 120 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AL139156.1-201ENST00000412785 841 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 AL159169.1-201ENST00000421119 127 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 RPS7P5-201ENST00000441482 581 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC107015.1-201ENST00000466902 747 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC126182.1-201ENST00000478134 357 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 XKRY-201ENST00000510392 1100 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A5A8TX70 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A5A8TX70 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms