Protein–RNA interactions for Protein: A6NMZ7

COL6A6, Collagen alpha-6(VI) chain, humanhuman

Predictions only

Length 2,263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6A6NMZ7 AC123904.3-201ENST00000547218 814 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AL133370.2-201ENST00000619934 439 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AL021368.2-201ENST00000606125 5352 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AL139276.1-201ENST00000311910 1001 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 MIR1276-201ENST00000408707 83 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AP1B1P2-201ENST00000416196 106 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC233279.1-201ENST00000455300 423 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 MLLT10P2-201ENST00000506434 249 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 MTCYBP20-201ENST00000524239 1129 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC091515.1-201ENST00000548110 679 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AC009831.4-201ENST00000620744 325 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 AP006248.2-201ENST00000623309 592 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 GTF2H2B-203ENST00000508065 1432 ntBASIC1.96□□□□□ -2.1
COL6A6A6NMZ7 MTCO1P14-201ENST00000441695 1559 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 RNA5SP270-201ENST00000411361 118 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 MTND4LP21-201ENST00000415303 295 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 AL445646.1-201ENST00000431784 216 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 RPS15AP28-201ENST00000435088 386 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 RPL9P33-201ENST00000484311 566 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 MIR4255-201ENST00000579351 72 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 AC002064.3-201ENST00000623448 346 ntBASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL6A6A6NMZ7 MIR21-201ENST00000362134 72 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RNU2-2P-201ENST00000410396 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AP000275.1-201ENST00000411943 390 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC098826.1-201ENST00000433943 471 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 LINC00888-204ENST00000487386 421 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RNU6-319P-201ENST00000516025 108 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC011611.5-201ENST00000552477 578 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AL845331.3-202ENST00000562856 261 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.15-201ENST00000611544 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AL359198.2-201ENST00000611836 194 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.16-201ENST00000613119 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.12-201ENST00000613778 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.20-201ENST00000613956 192 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.9-201ENST00000615427 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.11-201ENST00000616345 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.2-201ENST00000616535 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.3-201ENST00000617785 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.19-201ENST00000618602 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RNU2-1-201ENST00000618664 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.6-201ENST00000619225 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.5-201ENST00000619465 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 U2.10-201ENST00000620268 191 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC009501.3-201ENST00000605001 1352 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 USP9YP6-201ENST00000413550 854 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 NDUFB4P6-201ENST00000436819 366 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC092473.1-201ENST00000441098 221 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 USP9YP34-201ENST00000453983 808 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RPL23AP62-201ENST00000463396 453 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RN7SL283P-201ENST00000489055 303 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 VTA1P2-201ENST00000520205 911 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AP000790.1-201ENST00000528891 737 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 PDCD5P1-201ENST00000543528 309 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 RPS3AP4-201ENST00000555161 764 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 VN1R80P-201ENST00000597126 338 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AC091834.1-201ENST00000614543 472 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 AL391597.1-201ENST00000618707 694 ntBASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
COL6A6A6NMZ7 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL6A6A6NMZ7 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms