Protein–RNA interactions for Protein: A6NKD9

CCDC85C, Coiled-coil domain-containing protein 85C, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85CA6NKD9 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC021146.4-201ENST00000309229 279 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 RNU6-1078P-201ENST00000364522 103 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 RNU6-780P-201ENST00000391030 104 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 RPL21P65-201ENST00000406094 466 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 HMGN1P24-201ENST00000412282 298 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 USP9YP6-201ENST00000413550 854 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 OR2AH1P-201ENST00000425717 928 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC010655.1-201ENST00000449336 292 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 NANOGP10-201ENST00000453325 895 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 RNU7-59P-201ENST00000459101 61 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AL049873.1-201ENST00000480540 376 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC021146.1-201ENST00000511202 716 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC006254.3-201ENST00000603353 884 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC012507.3-201ENST00000603556 477 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC007038.2-201ENST00000608095 740 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AL121772.2-201ENST00000614331 297 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC022306.2-201ENST00000617563 647 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC009161.2-201ENST00000624626 138 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 AC009093.8-201ENST00000641769 292 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 MTND5P3-201ENST00000438536 1800 ntBASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CCDC85CA6NKD9 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNA5SP432-201ENST00000362480 116 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNU6-1085P-201ENST00000363576 107 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNU6-1097P-201ENST00000363586 107 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNU1-59P-201ENST00000364829 162 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNY3P14-201ENST00000384309 102 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNU6-837P-201ENST00000391056 108 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RPS4XP8-201ENST00000402039 771 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 FGF7P8-201ENST00000402994 292 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNU2-47P-201ENST00000410649 186 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RNU2-62P-201ENST00000410868 191 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC092447.6-201ENST00000414578 210 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AL391219.1-201ENST00000422570 483 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC079382.1-201ENST00000493346 557 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC020893.1-201ENST00000502452 580 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC105914.1-201ENST00000511798 226 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 OR4R3P-201ENST00000525084 838 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AP000827.1-201ENST00000527814 258 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AP000857.1-201ENST00000532151 543 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 SUB1P2-201ENST00000556401 297 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AL359212.1-201ENST00000556608 614 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC004067.1-201ENST00000608733 700 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC139792.3-201ENST00000623525 224 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC112204.3-201ENST00000623822 332 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 PCAT14-202ENST00000627127 3935 ntBASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCDC85CA6NKD9 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 TLK1P1-201ENST00000456760 2440 ntBASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCDC85CA6NKD9 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms