Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MFSD8-245ENST00000641743 948 ntBASIC1.37□□□□□ -2.19
LINC01546A6NGU7 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01546A6NGU7 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
LINC01546A6NGU7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 CRP-202ENST00000368110 667 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 MIR196B-201ENST00000384852 84 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 TAS2R15P-201ENST00000390674 928 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC234782.4-201ENST00000417646 1048 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 NUP35P1-201ENST00000422734 947 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 Z99127.2-201ENST00000441426 334 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 GPM6BP3-201ENST00000442797 145 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 PPP1R2P5-201ENST00000457256 603 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 OR4G11P-201ENST00000492842 939 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC114322.1-201ENST00000506771 926 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 RN7SKP31-201ENST00000516354 278 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AP001521.1-201ENST00000609150 300 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AC068831.7-201ENST00000616954 363 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 CR392039.4-201ENST00000624968 501 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 AL137790.1-201ENST00000634283 177 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 MTND5P6-201ENST00000422338 1798 ntBASIC1.36□□□□□ -2.19
LINC01546A6NGU7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LINC01546A6NGU7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 SNORA71.3-201ENST00000362582 128 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 RNU6-461P-201ENST00000364195 107 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 SNORA51.2-201ENST00000364595 132 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 MIR627-201ENST00000384979 97 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 ATF1P1-201ENST00000406040 927 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 HNRNPDLP1-201ENST00000412834 550 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 ZNF90P2-204ENST00000419323 1075 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC022022.1-201ENST00000430304 178 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 NECAP1P2-201ENST00000455668 727 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 MTAPP1-201ENST00000489154 819 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 HMGB3P17-201ENST00000504195 649 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 RNU4-29P-201ENST00000515943 174 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 COX6CP5-201ENST00000527162 228 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC027176.1-201ENST00000560204 514 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC009127.3-201ENST00000570531 403 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 RNA5SP108-201ENST00000605921 117 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AL136295.6-201ENST00000610486 658 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AC006065.5-201ENST00000623427 349 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 OR1S1-201ENST00000624470 978 ntBASIC1.35□□□□□ -2.19
LINC01546A6NGU7 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
LINC01546A6NGU7 MTND4P27-201ENST00000450813 1354 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.34□□□□□ -2.19
LINC01546A6NGU7 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC1.34□□□□□ -2.19
LINC01546A6NGU7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.34□□□□□ -2.19
LINC01546A6NGU7 SNORA16.1-201ENST00000364597 132 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 SNORA14A-201ENST00000364773 135 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 SNORA36C-201ENST00000384289 132 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 SNORA46.1-201ENST00000391069 153 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LINC01546A6NGU7 BTF3P7-201ENST00000407097 488 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 SNORA11.4-201ENST00000408823 129 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 RNA5SP184-201ENST00000411071 108 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 AL357078.2-201ENST00000416486 427 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 HMGN2P30-201ENST00000423237 256 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 YME1L1P1-201ENST00000429435 297 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 RPL21P112-201ENST00000434403 463 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 XKRY2-201ENST00000442362 1093 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 IFNA11P-201ENST00000446352 526 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01546A6NGU7 AL109933.2-201ENST00000452651 260 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 AL139109.1-201ENST00000455491 297 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.34□□□□□ -2.19
LINC01546A6NGU7 ATG12P2-201ENST00000456830 416 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 RPS29P20-201ENST00000489592 171 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 AC008427.1-201ENST00000503102 655 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 MTND3P24-201ENST00000506306 329 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 CCNHP1-201ENST00000513311 678 ntBASIC1.34□□□□□ -2.19
LINC01546A6NGU7 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms