Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 VN1R104P-201ENST00000505115 1009 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC114322.1-201ENST00000506771 926 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC008885.2-201ENST00000509506 930 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 FABP5P6-201ENST00000510588 409 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 OR5BM1P-201ENST00000512021 366 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 SNORA74D-201ENST00000516404 141 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 RNA5SP471-201ENST00000516971 106 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 SUB1P1-201ENST00000524415 382 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC060766.3-201ENST00000591442 263 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 AC013468.1-201ENST00000608680 598 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 CR381653.2-201ENST00000624041 768 ntBASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
TRAV13-1A0A0B4J241 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 RNU6-1226P-201ENST00000384317 107 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 RNU6-1072P-201ENST00000384703 107 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 RNU6-443P-201ENST00000384780 107 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR7-3-201ENST00000384898 110 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 MOB4-205ENST00000409916 829 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 RPS3AP9-201ENST00000417027 792 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 MORF4L1P7-201ENST00000426038 703 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC093156.1-201ENST00000440382 670 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC097499.1-201ENST00000444277 208 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC011753.1-201ENST00000451001 220 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 MRPL35P4-201ENST00000453682 566 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 SCARNA13-201ENST00000516672 275 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AP000790.1-201ENST00000528891 737 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AL355836.1-201ENST00000555951 870 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AL049874.4-201ENST00000557593 255 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR3158-1-201ENST00000583596 81 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 OR1M4P-201ENST00000589199 287 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC024153.1-201ENST00000603103 365 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AL136363.1-201ENST00000605349 337 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC069200.1-201ENST00000609511 323 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 AC006133.1-201ENST00000617106 264 ntBASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
TRAV13-1A0A0B4J241 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC244517.1-201ENST00000606030 2086 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR6073-201ENST00000352083 89 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 MIR422A-201ENST00000362286 90 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 OR52E6-202ENST00000379946 954 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 RNVU1-14-201ENST00000384770 164 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 RNA5SP210-201ENST00000391034 120 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 ATP5F1P3-201ENST00000397213 657 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AL138885.1-201ENST00000405921 675 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 SNORA11B-201ENST00000408175 129 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 RPS15AP38-201ENST00000413110 372 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 OR6C71P-201ENST00000432580 913 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AP000926.3-201ENST00000497201 299 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 MLLT10P2-201ENST00000506434 249 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 CBX3P3-201ENST00000508108 532 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC006445.2-201ENST00000510061 472 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC113155.1-201ENST00000511141 769 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 AC104057.1-201ENST00000515547 497 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 RNA5SP402-201ENST00000517148 110 ntBASIC1.86□□□□□ -2.11
TRAV13-1A0A0B4J241 IGLV3-17-201ENST00000519099 244 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms