Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC053481.3-201ENST00000577881 843 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC009977.1-201ENST00000586015 570 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AL513477.2-201ENST00000607858 568 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 OR6R2P-201ENST00000609216 300 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC006133.1-201ENST00000617106 264 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 MIR4727-201ENST00000622232 55 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC006065.6-201ENST00000625201 545 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC068137.3-201ENST00000639191 341 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC099654.12-201ENST00000639868 649 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 AC073869.6-201ENST00000640656 341 ntBASIC4.19□□□□□ -1.74
VPS4AQ9UN37 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 SCAI-201ENST00000336505 12079 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
VPS4AQ9UN37 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MTND5P26-201ENST00000426018 1752 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MTND4LP20-201ENST00000402379 270 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AL022722.2-201ENST00000402519 180 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 SNORA11.1-201ENST00000408133 129 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RPS3AP3-201ENST00000411933 242 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 FCF1P9-201ENST00000412546 282 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 SNRPFP1-201ENST00000414761 252 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RPS23P10-201ENST00000416185 486 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MTATP6P27-201ENST00000416987 621 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RPL31P45-201ENST00000419532 356 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RPL23AP38-201ENST00000423801 469 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 OR8F1P-201ENST00000425243 930 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MTND6P13-201ENST00000443510 523 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RN7SL132P-201ENST00000478131 296 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RPL7P24-201ENST00000493052 752 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC112204.1-201ENST00000502591 103 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC105252.1-201ENST00000503089 286 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AP003467.2-201ENST00000520175 319 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 PHBP17-201ENST00000528576 541 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AP003122.4-201ENST00000530980 758 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC016957.1-201ENST00000534895 309 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC025884.1-201ENST00000556034 378 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 ZNF519P3-201ENST00000557158 1032 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 MTATP6P3-201ENST00000581686 676 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 BBIP1P1-201ENST00000602999 279 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AC010680.3-201ENST00000604215 520 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
VPS4AQ9UN37 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.18□□□□□ -1.74
VPS4AQ9UN37 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
VPS4AQ9UN37 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
VPS4AQ9UN37 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.17□□□□□ -1.74
VPS4AQ9UN37 SPRR2C-201ENST00000290702 219 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
VPS4AQ9UN37 AL161781.1-201ENST00000354277 403 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 RNU6-809P-201ENST00000384461 107 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 SNORA11F-201ENST00000408237 128 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4AQ9UN37 PSMA6P3-201ENST00000428242 164 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 AC009961.2-201ENST00000435771 251 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 AC127537.2-201ENST00000439258 465 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 FAM103A2P-201ENST00000444122 354 ntBASIC4.17□□□□□ -1.74
VPS4AQ9UN37 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.17□□□□□ -1.74
VPS4AQ9UN37 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms