Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 MTCYBP28-201ENST00000566728 1132 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AC009570.1-201ENST00000609599 745 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 AL137847.3-201ENST00000611521 109 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 SNORA50A-202ENST00000629536 136 ntBASIC2.79□□□□□ -1.96
SCN11AQ9UI33 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
SCN11AQ9UI33 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-1320P-201ENST00000390838 107 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-1269P-201ENST00000391139 107 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 SNORA11.4-201ENST00000408823 129 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-321P-201ENST00000410912 106 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-599P-201ENST00000459383 107 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-1193P-201ENST00000459461 107 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AC021733.2-201ENST00000518830 497 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AK6P1-201ENST00000540219 478 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AL160237.3-201ENST00000604114 1013 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AL451074.6-201ENST00000608512 729 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-368P-201ENST00000620928 107 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 RNU6-538P-201ENST00000622329 107 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AC025125.1-201ENST00000624743 1922 ntBASIC2.78□□□□□ -1.96
SCN11AQ9UI33 AC005539.1-201ENST00000443768 1479 ntBASIC2.78□□□□□ -1.97
SCN11AQ9UI33 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 U8.9-201ENST00000365667 134 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 TRAPPC2P10-201ENST00000415662 323 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AP000705.1-201ENST00000454567 350 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 MIR4781-201ENST00000585250 76 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AC022336.2-201ENST00000568966 2538 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AC092447.7-201ENST00000422212 1621 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 RNU1-17P-201ENST00000363022 152 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 NPM1P10-201ENST00000398310 865 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 Z82205.1-201ENST00000428456 297 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AL118520.1-201ENST00000450770 291 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 OR8X1P-201ENST00000534542 869 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AC245517.5-201ENST00000611529 162 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 AC004943.3-201ENST00000624116 600 ntBASIC2.77□□□□□ -1.97
SCN11AQ9UI33 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AC008571.1-201ENST00000467232 300 ntBASIC2.76□□□□□ -1.97
SCN11AQ9UI33 RPL23AP70-201ENST00000483361 460 ntBASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
SCN11AQ9UI33 MTND5P28-201ENST00000438005 1594 ntBASIC2.76□□□□□ -1.97
SCN11AQ9UI33 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 AL356292.1-201ENST00000283110 373 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 Y_RNA.796-201ENST00000364268 102 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 Y_RNA.799-201ENST00000364992 102 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 TRIAP1P1-201ENST00000427062 225 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 RPL23AP42-201ENST00000471152 471 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 AC010198.2-201ENST00000550612 259 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 AC083899.3-201ENST00000603413 594 ntBASIC2.75□□□□□ -1.97
SCN11AQ9UI33 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SCN11AQ9UI33 AC000367.1-201ENST00000452711 1766 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 HSPE1P26-201ENST00000405341 275 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 AL450338.1-201ENST00000407987 512 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 UBE2V2P1-201ENST00000434717 398 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 RPL7P31-201ENST00000450192 724 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 GNAI2P1-201ENST00000541815 315 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 AL159169.2-201ENST00000610061 1269 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 RNA5SP344-201ENST00000411081 104 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 AC092754.2-201ENST00000463506 460 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.74□□□□□ -1.97
SCN11AQ9UI33 OR4K7P-201ENST00000580232 945 ntBASIC2.74□□□□□ -1.97
SCN11AQ9UI33 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 91.1 ms