Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC245036.5-201ENST00000596330 847 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AC128687.1-201ENST00000605304 619 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 RPL23AP88-201ENST00000605759 454 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 AL360181.4-201ENST00000621752 134 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 U6.107-201ENST00000637108 79 ntBASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VPS29Q9UBQ0 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 SNORA70.4-201ENST00000365509 134 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 RNU6-339P-201ENST00000384310 107 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 MIR491-201ENST00000384877 84 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 MIR128-1-201ENST00000384921 82 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 SNORA48.2-201ENST00000390926 124 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AL360182.1-201ENST00000397433 468 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AL356057.3-201ENST00000402607 340 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 RPLP0P7-201ENST00000416050 667 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 USP9YP20-201ENST00000419224 558 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC105272.1-201ENST00000438604 198 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC004865.1-201ENST00000442276 1003 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 CACYBPP2-201ENST00000453625 678 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC092470.1-201ENST00000546187 132 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC123904.3-201ENST00000547218 814 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 MIR5092-201ENST00000583139 88 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 ELOCP29-201ENST00000588193 334 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC011374.2-201ENST00000607135 526 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 AC009570.1-201ENST00000609599 745 ntBASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS29Q9UBQ0 SGO1P2-201ENST00000429458 1589 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 RNA5SP387-201ENST00000364226 106 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 SNORD56.5-201ENST00000364281 72 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 Y_RNA.333-201ENST00000365274 102 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 RNU1-109P-201ENST00000383960 147 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 MTND4P13-201ENST00000402078 1023 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC006946.1-201ENST00000429106 328 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC107083.1-201ENST00000439643 279 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 RPL30P14-201ENST00000482744 348 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 RPL21P131-201ENST00000497298 483 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 MTCO3P44-201ENST00000510977 541 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 RNU6-826P-201ENST00000516827 104 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 HAUS1P3-201ENST00000523909 662 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AP003102.1-201ENST00000525638 661 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC084033.1-201ENST00000550830 633 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 MIR6076-201ENST00000617521 113 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 ZNF833P-201ENST00000424938 1494 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
VPS29Q9UBQ0 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC011460.1-201ENST00000636268 1834 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 GNG5P1-201ENST00000255500 204 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 VTRNA1-1-201ENST00000363120 99 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 SNORA51.12-201ENST00000384448 134 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC2.48□□□□□ -2.01
VPS29Q9UBQ0 CYCSP32-201ENST00000440548 321 ntBASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms