Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC023194.1-201ENST00000493084 308 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC019235.1-201ENST00000503847 207 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC006499.6-201ENST00000511169 607 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 FTH1P9-201ENST00000513251 355 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 HMGN1P28-201ENST00000521340 364 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 DEFB108D-201ENST00000527787 222 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 CCNG2P1-201ENST00000549521 1000 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC006116.3-201ENST00000592968 361 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 BNIP3P33-201ENST00000598912 569 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC025946.2-201ENST00000603398 234 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC093838.1-201ENST00000613014 469 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AC022467.1-201ENST00000614738 749 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 MIR6130-201ENST00000619419 109 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 C2orf27A-204ENST00000623058 969 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 AL355480.1-201ENST00000629041 99 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 ELF2P3-201ENST00000445099 1506 ntBASIC4.56□□□□□ -1.68
MKS1Q9NXB0 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.56□□□□□ -1.68
MKS1Q9NXB0 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 NXPH1-205ENST00000602349 1953 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AL391684.1-202ENST00000641293 1636 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 RNU1-63P-201ENST00000383902 164 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 RNU1-106P-201ENST00000384382 164 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MIR223-201ENST00000385204 110 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 RAC1P3-201ENST00000416129 580 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MTCO2P19-201ENST00000427513 598 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 RPL23AP25-201ENST00000430973 463 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC009646.1-201ENST00000510455 318 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 RNU6-718P-201ENST00000516166 105 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MYL12AP1-201ENST00000518490 515 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 RPL23AP97-201ENST00000568955 471 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MIR3176-201ENST00000582210 90 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AL391646.1-201ENST00000603860 190 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AC008277.2-201ENST00000605196 797 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 AL136363.1-201ENST00000605349 337 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 MIR6729-201ENST00000618194 65 ntBASIC4.55□□□□□ -1.68
MKS1Q9NXB0 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
MKS1Q9NXB0 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RNA5SP52-201ENST00000362448 134 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 SNORA51.1-201ENST00000363243 140 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RNU6-629P-201ENST00000384061 103 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 BTF3P7-201ENST00000407097 488 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 RN7SKP267-201ENST00000410381 285 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 MTND1P23-201ENST00000416931 372 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 FTH1P6-201ENST00000430768 320 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 MRPS10P2-201ENST00000431226 381 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC069285.2-201ENST00000440210 275 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 FGF7P6-202ENST00000451282 293 ntBASIC4.54□□□□□ -1.68
MKS1Q9NXB0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.54□□□□□ -1.68
MKS1Q9NXB0 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms