Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 OR6K3-202ENST00000368146 996 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 RNU6-468P-201ENST00000384003 109 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 MTCYBP32-201ENST00000427945 1084 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 FO393414.1-201ENST00000428697 1184 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 MTCYBP15-201ENST00000433123 1127 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC011242.1-201ENST00000433596 1158 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC091390.1-201ENST00000433904 331 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 YWHAZP7-201ENST00000436906 631 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AL645638.1-201ENST00000440519 361 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 OR5G4P-201ENST00000525251 760 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC113192.3-201ENST00000529152 742 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AP003049.1-201ENST00000529418 457 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 ZNF971P-201ENST00000562068 1249 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 CKS1BP3-201ENST00000600888 237 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 RPAP2P1-201ENST00000603626 1168 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC106900.2-201ENST00000604994 317 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AP000238.1-201ENST00000608759 426 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC100793.4-201ENST00000613683 429 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC039056.2-201ENST00000622261 511 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC099506.2-201ENST00000623074 221 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC139713.2-210ENST00000641741 992 ntBASIC2.73□□□□□ -1.97
CLN6Q9NWW5 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
CLN6Q9NWW5 AC090740.1-201ENST00000623193 2262 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AL136520.1-201ENST00000600311 1322 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 RNU6-173P-201ENST00000364215 104 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 RPL22P22-201ENST00000395439 379 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC016769.3-201ENST00000396562 315 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 MIR1193-201ENST00000408109 78 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 Y_RNA.625-201ENST00000411256 107 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC245052.5-201ENST00000416320 649 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC092634.6-201ENST00000418558 192 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 MTCO3P1-205ENST00000422088 832 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 USP9YP36-201ENST00000424581 829 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 HMGN2P31-201ENST00000432430 273 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 MUPP-201ENST00000438111 566 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC000041.1-201ENST00000439655 175 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 COX6CP2-201ENST00000444980 225 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 RPS29P2-201ENST00000479278 136 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC008628.1-201ENST00000508663 265 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 SNORA48.10-201ENST00000516965 160 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC007536.1-201ENST00000533382 349 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC011611.1-201ENST00000552179 197 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 MTCYBP27-201ENST00000555160 670 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC034105.3-201ENST00000565294 442 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC106785.1-201ENST00000565935 262 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC034268.2-201ENST00000571784 482 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 MIR4666A-201ENST00000580160 79 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC092954.1-201ENST00000609121 445 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC009570.1-201ENST00000609599 745 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC138932.5-201ENST00000617759 563 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC091046.2-201ENST00000620775 665 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC022509.4-201ENST00000621404 572 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AL353748.2-201ENST00000622148 471 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AL356094.1-201ENST00000624663 1212 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 CYP3A51P-201ENST00000633513 256 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC026634.1-201ENST00000634369 198 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC012442.3-202ENST00000636742 206 ntBASIC2.72□□□□□ -1.97
CLN6Q9NWW5 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.72□□□□□ -1.97
CLN6Q9NWW5 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms