Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 OR4R3P-201ENST00000525084 838 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AP003122.4-201ENST00000530980 758 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 AP000860.1-201ENST00000605250 559 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC126118.1-201ENST00000607744 628 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC068944.2-201ENST00000610373 403 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC007546.2-201ENST00000623996 360 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 AC034229.5-201ENST00000624258 185 ntBASIC4.86□□□□□ -1.63
VTA1Q9NP79 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTA1Q9NP79 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VTA1Q9NP79 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTA1Q9NP79 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTA1Q9NP79 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 RNY4P34-201ENST00000364779 95 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC019155.1-201ENST00000382242 574 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 SNORA48.7-201ENST00000391302 135 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 GSTA9P-201ENST00000406231 611 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 RNA5SP56-201ENST00000410277 118 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC005517.2-201ENST00000424673 553 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AL117339.2-201ENST00000430475 180 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 RPL23AP33-201ENST00000442301 452 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 NANOGNBP1-201ENST00000448444 480 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 PPIAP3-201ENST00000450588 505 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 RPS4XP18-201ENST00000495480 763 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC109927.2-201ENST00000506416 303 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC108078.1-201ENST00000508073 725 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 TMEM248P1-201ENST00000510579 951 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 IGKV2D-36-201ENST00000518643 226 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC105233.3-201ENST00000531125 744 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTA1Q9NP79 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 AL352979.3-201ENST00000553515 247 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 TPRKBP2-201ENST00000565969 475 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 MIR4458-201ENST00000578872 75 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 HMGN1P30-201ENST00000589286 268 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC011451.2-201ENST00000604303 598 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC006329.2-201ENST00000611491 394 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 LINC00901.1-201ENST00000617252 152 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC007546.1-201ENST00000619452 559 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC091925.2-201ENST00000625059 256 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 AC110994.2-201ENST00000635481 492 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTA1Q9NP79 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VTA1Q9NP79 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 Z73965.1-201ENST00000623412 2297 ntBASIC4.85□□□□□ -1.63
VTA1Q9NP79 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VTA1Q9NP79 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.85□□□□□ -1.63
VTA1Q9NP79 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC090229.1-201ENST00000590983 1609 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC093536.2-201ENST00000565257 1406 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 RNA5SP283-201ENST00000365604 119 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 MIR153-1-201ENST00000384914 90 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC009237.10-201ENST00000414112 510 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC108032.1-201ENST00000416706 207 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VTA1Q9NP79 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 UBDP1-202ENST00000457888 382 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC4.84□□□□□ -1.63
VTA1Q9NP79 MTCO2P29-201ENST00000465212 189 ntBASIC4.84□□□□□ -1.63
VTA1Q9NP79 RPL21P129-201ENST00000491732 478 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms