Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MIR4303-201ENST00000581299 66 ntBASIC2.08□□□□□ -2.08
CHD8Q9HCK8 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.08□□□□□ -2.08
CHD8Q9HCK8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.08□□□□□ -2.08
CHD8Q9HCK8 MIR1291-201ENST00000627649 87 ntBASIC2.08□□□□□ -2.08
CHD8Q9HCK8 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHD8Q9HCK8 FER-202ENST00000438717 1531 ntTSL 2 BASIC2.08□□□□□ -2.08
CHD8Q9HCK8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
CHD8Q9HCK8 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
CHD8Q9HCK8 AC022336.2-201ENST00000568966 2538 ntBASIC2.08□□□□□ -2.08
CHD8Q9HCK8 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL139156.1-201ENST00000412785 841 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AC127526.1-201ENST00000417526 366 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL365396.1-201ENST00000430854 671 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 RPS15AP28-201ENST00000435088 386 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 OR10D4P-201ENST00000525892 951 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AC016957.1-201ENST00000534895 309 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AC244517.1-201ENST00000606030 2086 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL355379.1-201ENST00000405542 640 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL451074.5-201ENST00000415894 435 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 MTCO2P17-201ENST00000424336 677 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 KATNBL1P3-201ENST00000443475 909 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 VN1R17P-201ENST00000472048 1090 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL137100.2-201ENST00000555786 315 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL583832.1-201ENST00000603227 784 ntBASIC2.07□□□□□ -2.08
CHD8Q9HCK8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.07□□□□□ -2.08
CHD8Q9HCK8 AL391987.6-201ENST00000305671 199 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC004965.1-201ENST00000413033 213 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 HMGB1P12-201ENST00000438594 598 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 RN7SL75P-201ENST00000461926 281 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC007620.3-201ENST00000608131 497 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 RNU6-1027P-201ENST00000383998 107 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 RPS12P23-201ENST00000419579 400 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 OR6C64P-201ENST00000419708 825 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC017007.3-201ENST00000479865 435 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC114801.2-201ENST00000503825 781 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 AC007342.7-201ENST00000624610 2337 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 MTND4P10-201ENST00000446199 1363 ntBASIC2.06□□□□□ -2.08
CHD8Q9HCK8 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CHD8Q9HCK8 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 RNU1-75P-201ENST00000347264 129 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 AL121834.1-202ENST00000404494 277 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 KATNBL1P4-201ENST00000503545 918 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 MIR5007-201ENST00000583098 95 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 LINC00901.1-201ENST00000617252 152 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 SNORA25.6-201ENST00000364121 118 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 RN7SKP226-201ENST00000364912 300 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 AC091544.1-201ENST00000484702 348 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 MYL12BP1-201ENST00000569826 507 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 AC012360.2-201ENST00000609349 391 ntBASIC2.05□□□□□ -2.08
CHD8Q9HCK8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.05□□□□□ -2.08
CHD8Q9HCK8 RNY1P4-201ENST00000384595 115 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 MRPL50P4-201ENST00000446432 475 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 OR10AB1P-201ENST00000609613 938 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC103710.1-201ENST00000610003 901 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AL020991.1-201ENST00000612314 373 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AL035405.1-201ENST00000400795 710 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 RPL30P2-201ENST00000414021 291 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 MED6P1-201ENST00000439659 713 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AP004217.1-201ENST00000480579 346 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC2.04□□□□□ -2.08
CHD8Q9HCK8 OR52A4P-203ENST00000498233 1014 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC245166.1-201ENST00000521012 253 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC087441.2-201ENST00000529141 262 ntBASIC2.04□□□□□ -2.08
CHD8Q9HCK8 AC025260.1-201ENST00000548858 430 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms