Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 OR5G4P-201ENST00000525251 760 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AL161729.3-201ENST00000603533 673 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC112191.3-201ENST00000604371 277 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC068944.2-201ENST00000610373 403 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 AC131902.3-201ENST00000611767 581 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 CYP3A51P-201ENST00000633513 256 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 ZNF33CP-201ENST00000432492 2030 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 LARP1BP1-201ENST00000506036 1359 ntBASIC4.27□□□□□ -1.73
USP29Q9HBJ7 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.27□□□□□ -1.73
USP29Q9HBJ7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 FAM35DP-201ENST00000323387 2712 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 MARK2P15-201ENST00000432204 2186 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 Y_RNA.582-201ENST00000391023 95 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AL031679.1-201ENST00000400616 525 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 SSXP10-201ENST00000402595 565 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 BTBD10P2-201ENST00000404779 676 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 USP9YP13-201ENST00000417797 480 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 BX890604.2-201ENST00000427883 474 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 OR2B8P-201ENST00000432841 938 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 BTF3P10-201ENST00000433415 495 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 OR4C10P-201ENST00000434991 931 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AP000542.1-201ENST00000448473 371 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 PAXBP1P1-201ENST00000449315 447 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AL590365.1-201ENST00000450788 243 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 KLF3P2-201ENST00000465138 268 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 RPS27AP13-201ENST00000498403 237 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC108064.1-201ENST00000513791 460 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 MTND4LP26-201ENST00000518144 282 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC022861.1-201ENST00000522981 663 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 ZNF519P3-201ENST00000557158 1032 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC022916.3-201ENST00000592961 742 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 BNIP3P8-201ENST00000597863 560 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC025946.2-201ENST00000603398 234 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 HMGB1P50-201ENST00000605814 607 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AP005264.7-201ENST00000625003 745 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC099654.13-201ENST00000639774 207 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 MTND5P26-201ENST00000426018 1752 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 AC093536.2-201ENST00000565257 1406 ntBASIC4.26□□□□□ -1.73
USP29Q9HBJ7 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
USP29Q9HBJ7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC090229.1-201ENST00000590983 1609 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 SPRR2C-201ENST00000290702 219 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 RNU6-533P-201ENST00000384144 107 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 RNU6-809P-201ENST00000384461 107 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 Y_RNA.608-201ENST00000410647 95 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 JKAMPP1-201ENST00000413804 919 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC091862.1-201ENST00000438016 1100 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 RPL7P36-201ENST00000444633 681 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC005297.2-201ENST00000450430 606 ntBASIC4.25□□□□□ -1.73
USP29Q9HBJ7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.25□□□□□ -1.73
USP29Q9HBJ7 MTCO1P42-201ENST00000457379 726 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 126.6 ms