Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 RNU2-28P-201ENST00000410457 189 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 RAC1P8-201ENST00000427086 527 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 Z93242.1-201ENST00000427102 353 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 OR2AS1P-201ENST00000427827 319 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AL353705.1-201ENST00000433468 480 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC009969.1-201ENST00000438726 172 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 OR6K5P-201ENST00000447050 945 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC093392.2-201ENST00000450682 337 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC091179.1-201ENST00000461606 579 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 RPS17P11-201ENST00000474297 293 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 DYNLL1P6-201ENST00000503440 264 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC002456.2-201ENST00000509356 380 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC090330.1-201ENST00000588646 764 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC080188.3-201ENST00000624842 748 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 MAPK10-322ENST00000641485 4530 ntBASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
LRRC40Q9H9A6 AC103988.1-201ENST00000566382 2177 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RNU5D-1-201ENST00000363299 116 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RNU6-1066P-201ENST00000363573 105 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RNU6-657P-201ENST00000383904 107 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RNU6-468P-201ENST00000384003 109 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 MIR493-201ENST00000385254 89 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RPS4XP3-201ENST00000398541 413 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AL357075.1-201ENST00000404107 726 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC012498.1-201ENST00000424037 437 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 ARL4AP4-201ENST00000434170 518 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC004866.2-201ENST00000438285 481 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RPS12P18-201ENST00000442381 270 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RPL30P14-201ENST00000482744 348 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 BOLA3P3-201ENST00000505182 232 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC111000.2-201ENST00000507775 550 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC010625.1-201ENST00000511296 403 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC023632.1-201ENST00000518463 375 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC239860.2-201ENST00000525886 270 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC044913.1-201ENST00000557200 430 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 RN7SL339P-201ENST00000580597 296 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC008739.3-201ENST00000603262 127 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AL022099.1-201ENST00000604551 712 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC019176.2-201ENST00000611579 315 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 MIR7975-201ENST00000619350 68 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC093875.1-201ENST00000623688 504 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC093908.1-201ENST00000623125 8092 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AC011460.1-201ENST00000636268 1834 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 AL513185.3-201ENST00000433335 1300 ntBASIC3.19□□□□□ -1.9
LRRC40Q9H9A6 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 CD24P4-201ENST00000382840 243 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 SNORA46-201ENST00000384762 135 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AL136372.1-201ENST00000403060 228 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AL512637.2-201ENST00000431287 1256 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC108734.1-201ENST00000439549 399 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AL590664.1-201ENST00000448065 339 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 COX6CP18-201ENST00000448769 222 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 RFC5P1-201ENST00000454419 874 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 RPL21P18-201ENST00000469899 480 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 AC109925.1-201ENST00000478069 331 ntBASIC3.18□□□□□ -1.9
LRRC40Q9H9A6 WBP1LP4-201ENST00000505043 344 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms