Protein–RNA interactions for Protein: Q9GZZ0

HOXD1, Homeobox protein Hox-D1, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1Q9GZZ0 AL024474.1-201ENST00000404655 591 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AL953862.1-201ENST00000423016 168 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AL365203.2-201ENST00000423444 196 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 MTND4P20-201ENST00000424125 869 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 TXNL1P1-201ENST00000429528 554 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 EEF1E1P1-201ENST00000446998 430 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 MTND2P19-201ENST00000449129 1012 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 ARPC3P2-201ENST00000457786 533 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 SNORD108-201ENST00000459332 71 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 BZW1P2-201ENST00000473537 826 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC092185.1-201ENST00000491371 97 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 HMGN1P11-201ENST00000508668 303 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 LTV1P1-201ENST00000510683 1237 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC010486.3-201ENST00000511602 785 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC010265.1-201ENST00000513509 211 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 MTCYBP43-201ENST00000513621 740 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 RNU2-58P-201ENST00000516403 183 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 TGIF1P1-201ENST00000558095 802 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC090616.2-202ENST00000584248 222 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC010680.4-201ENST00000605334 543 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC072039.2-201ENST00000608883 439 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC090116.1-201ENST00000615679 446 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC009318.4-201ENST00000620496 486 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AC138649.5-201ENST00000637456 137 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 AL359893.1-201ENST00000447628 1580 ntBASIC3.38□□□□□ -1.87
HOXD1Q9GZZ0 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 SNORD82-201ENST00000365530 70 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 DHFRP6-201ENST00000401776 268 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RNU6-55P-201ENST00000411092 107 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RNU6-954P-201ENST00000411355 107 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RPL31P2-201ENST00000413849 377 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 HSFY4P-201ENST00000415994 1181 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 DNAJA1P2-201ENST00000421360 1197 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 MTND1P20-201ENST00000430341 950 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 CYCSP43-201ENST00000438233 310 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL117351.1-201ENST00000438864 766 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC127537.2-201ENST00000439258 465 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RPS20P32-201ENST00000456044 356 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC026410.2-201ENST00000460281 156 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC097493.1-201ENST00000463958 372 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RPS3AP50-201ENST00000487064 803 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RPF2P2-201ENST00000504693 896 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 MTCO3P44-201ENST00000510977 541 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC006499.2-201ENST00000513470 337 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC026402.1-201ENST00000513642 170 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 RNU6-579P-201ENST00000516879 102 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC012435.1-202ENST00000568772 240 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC135628.1-201ENST00000568867 534 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC008507.1-201ENST00000587506 734 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 Z99497.2-201ENST00000603634 310 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AP000811.1-201ENST00000603803 651 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 CLPTM1LP1-201ENST00000604519 484 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL513477.2-201ENST00000607858 568 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC097065.2-201ENST00000608159 533 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL159169.3-201ENST00000608871 561 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL354976.1-201ENST00000613843 387 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AC079248.2-201ENST00000623779 326 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 OR8B1P-202ENST00000641132 1178 ntBASIC3.37□□□□□ -1.87
HOXD1Q9GZZ0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms