Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 MCTS2P-201ENST00000394552 546 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AL357075.1-201ENST00000404107 726 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 FAT1P1-201ENST00000406588 507 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RNA5SP44-201ENST00000410446 133 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 Z93242.1-201ENST00000427102 353 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RPL21P40-201ENST00000428586 483 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC115115.1-201ENST00000449927 248 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RPL21P8-201ENST00000465083 535 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RPL7P49-201ENST00000471402 708 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AL358832.1-201ENST00000497800 389 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC093801.2-201ENST00000503966 1050 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AP003066.2-201ENST00000529375 555 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC006518.1-201ENST00000541449 943 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 RPL21P12-201ENST00000559810 515 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 MIR3944-201ENST00000581277 108 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 ZNF415P1-201ENST00000582279 1166 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC073387.2-201ENST00000604797 784 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AL451074.6-201ENST00000608512 729 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 MAPK10-362ENST00000641864 4484 ntBASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
POLR1EQ9GZS1 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC110774.1-201ENST00000623567 2018 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 RNU6-657P-201ENST00000383904 107 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 RNU6-878P-201ENST00000384578 110 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 RAC1P8-201ENST00000427086 527 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 MTATP6P4-201ENST00000427725 675 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 ELOCP23-201ENST00000452014 332 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 MRPL42P4-201ENST00000453267 443 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 KLRA1P-201ENST00000503499 986 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 MIR2682-201ENST00000580305 110 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC008507.1-201ENST00000587506 734 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AL133393.1-201ENST00000603277 287 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC009220.3-201ENST00000604318 586 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC018926.1-201ENST00000616335 435 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC253576.2-201ENST00000618815 580 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AP000943.4-201ENST00000622912 357 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC091903.1-201ENST00000624322 454 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC080188.3-201ENST00000624842 748 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.26□□□□□ -1.89
POLR1EQ9GZS1 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 RPL7P27-201ENST00000403775 720 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 RNA5SP120-201ENST00000410900 112 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC245291.1-201ENST00000419501 328 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL137014.1-201ENST00000420490 1226 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 HSPE1P1-201ENST00000421494 318 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC013262.1-201ENST00000426710 252 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC006028.1-201ENST00000438379 402 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL645638.1-201ENST00000440519 361 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AL591503.2-201ENST00000442314 1005 ntBASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.25□□□□□ -1.89
POLR1EQ9GZS1 Z75741.1-201ENST00000446793 314 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms