Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AC011451.2-201ENST00000604303 598 ntBASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 AC068831.7-201ENST00000616954 363 ntBASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 AC022149.2-201ENST00000621061 203 ntBASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 AC006927.4-201ENST00000639187 543 ntBASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 AC007496.3-201ENST00000624987 3443 ntBASIC3.57□□□□□ -1.84
RAB3IPQ96QF0 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 DPY19L2P2-203ENST00000435536 1858 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC009812.4-201ENST00000569134 1805 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 ZNF807-201ENST00000328088 1707 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC007823.1-201ENST00000569932 1566 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 SNORA4.1-201ENST00000364263 144 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 RNU6-777P-201ENST00000364265 104 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 RPS3AP24-201ENST00000407896 734 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 CCDC58P2-201ENST00000417131 366 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AL807761.1-201ENST00000417622 171 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC068533.1-201ENST00000418542 415 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AP000907.1-201ENST00000428428 510 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC010655.1-201ENST00000449336 292 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 RNU6-528P-201ENST00000516926 100 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 VN1R82P-201ENST00000601481 356 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC008962.1-201ENST00000605729 304 ntBASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RAB3IPQ96QF0 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 MTCO1P9-201ENST00000505577 1534 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 DDX43P2-201ENST00000604753 1354 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL161781.1-201ENST00000354277 403 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RNU6-97P-201ENST00000363387 104 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RNA5SP366-201ENST00000365454 123 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RNU6-1207P-201ENST00000384343 107 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 MIR591-201ENST00000385290 95 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 ANAPC10P1-201ENST00000395991 556 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 MTHFD2P2-201ENST00000407725 247 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RPL21P32-201ENST00000419877 477 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 OR4K11P-201ENST00000431829 904 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 BTF3P10-201ENST00000433415 495 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 SNRPEP7-201ENST00000438350 220 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 USP9YP10-201ENST00000454868 628 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RNA5SP310-201ENST00000459084 116 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC021205.2-201ENST00000480069 347 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC041039.1-201ENST00000485656 536 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 SNORA70.16-201ENST00000516390 95 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 RNA5SP380-201ENST00000517190 98 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AP006245.1-201ENST00000522549 120 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 ERHP1-201ENST00000523006 310 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 YPEL5P3-201ENST00000547227 352 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC061975.8-201ENST00000587058 721 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL592221.1-201ENST00000605266 382 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC112220.3-201ENST00000605502 502 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AP002826.1-201ENST00000608835 315 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL136295.6-201ENST00000610486 658 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AC114781.5-201ENST00000615297 108 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL450472.3-201ENST00000615578 367 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 AL136981.2-201ENST00000617319 734 ntBASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
RAB3IPQ96QF0 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms