Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 Y_RNA.354-201ENST00000365448 111 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC104332.2-201ENST00000429959 156 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 TMEM248P1-201ENST00000510579 951 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AC025260.1-201ENST00000548858 430 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 MIR5007-201ENST00000583098 95 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 AF127577.6-201ENST00000623352 2191 ntBASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.8□□□□□ -2.12
CSMD1Q96PZ7 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 Y_RNA.327-201ENST00000365201 102 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 RPS27P27-201ENST00000498779 255 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 MIR9-3-201ENST00000385084 90 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 SAR1AP2-201ENST00000392696 594 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 UBE2V1P5-201ENST00000440070 405 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AL591719.1-201ENST00000444669 744 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AC007182.2-201ENST00000489251 402 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 RPL23AP63-201ENST00000498752 471 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AC091515.1-201ENST00000548110 679 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 HMGN2P47-201ENST00000559378 272 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AL139811.1-201ENST00000424779 2299 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AL355578.1-201ENST00000607405 1328 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AC016717.2-201ENST00000609089 5141 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 AL118520.1-201ENST00000450770 291 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 MTAPP1-201ENST00000489154 819 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 RN7SKP40-201ENST00000517211 242 ntBASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
CSMD1Q96PZ7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 EXOC5P1-201ENST00000510543 1969 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 RNA5SP220-201ENST00000516298 104 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 7SK.7-201ENST00000603504 247 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 RPAP2P1-201ENST00000603626 1168 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AC007620.3-201ENST00000608131 497 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AC093909.5-201ENST00000621839 1799 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 UBE2V1P6-201ENST00000430840 422 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 RPS7P2-201ENST00000435134 607 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 HAR1A.1-201ENST00000459583 118 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 OR4A45P-201ENST00000529954 901 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AL645944.1-201ENST00000603857 493 ntBASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC1.78□□□□□ -2.12
CSMD1Q96PZ7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 AC093151.1-201ENST00000427711 313 ntBASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 RNU7-170P-201ENST00000459303 61 ntBASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 AC017007.3-201ENST00000479865 435 ntBASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 MIR5092-201ENST00000583139 88 ntBASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 BX664608.1-201ENST00000610519 487 ntBASIC1.78□□□□□ -2.13
CSMD1Q96PZ7 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC009501.3-201ENST00000605001 1352 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 Y_RNA.36-201ENST00000362602 112 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC234782.4-201ENST00000417646 1048 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC003989.2-201ENST00000440224 169 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC068339.2-201ENST00000534395 618 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AMZ2P1-203ENST00000565833 850 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 MIR1183-201ENST00000408856 89 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 LAMTOR5P1-201ENST00000444290 270 ntBASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.77□□□□□ -2.13
CSMD1Q96PZ7 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms