Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 RN7SKP96-201ENST00000516948 297 ntBASIC1.97□□□□□ -2.09
AP1S3Q96PC3 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 AC103810.1-201ENST00000579873 453 ntBASIC1.97□□□□□ -2.09
AP1S3Q96PC3 TPMTP1-201ENST00000592307 737 ntBASIC1.97□□□□□ -2.09
AP1S3Q96PC3 NTAN1P1-201ENST00000603150 646 ntBASIC1.97□□□□□ -2.09
AP1S3Q96PC3 AL161756.2-201ENST00000604597 246 ntBASIC1.97□□□□□ -2.09
AP1S3Q96PC3 CR381572.1-201ENST00000625098 102 ntBASIC1.97□□□□□ -2.09
AP1S3Q96PC3 POMP-202ENST00000460403 1428 ntTSL 3 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC1.97□□□□□ -2.09
AP1S3Q96PC3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.96□□□□□ -2.09
AP1S3Q96PC3 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC073264.1-201ENST00000411508 416 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 USP9YP27-201ENST00000418455 438 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC114973.1-201ENST00000429057 632 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 TRAPPC13P1-201ENST00000435991 1062 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 Z99127.2-201ENST00000441426 334 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC112653.1-201ENST00000443851 386 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 RN7SL504P-201ENST00000494496 287 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 RPS27P27-201ENST00000498779 255 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 IGLV3-17-201ENST00000519099 244 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 OR10V3P-201ENST00000525712 725 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC053481.3-201ENST00000577881 843 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 MIR5092-201ENST00000583139 88 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AL020997.2-201ENST00000602607 184 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC124312.4-201ENST00000605533 310 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AP005212.4-201ENST00000614206 710 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 VN1R7P-201ENST00000619242 903 ntBASIC1.96□□□□□ -2.1
AP1S3Q96PC3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
AP1S3Q96PC3 AC005336.3-201ENST00000623833 2679 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC012321.1-201ENST00000561622 1588 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL596028.1-201ENST00000326971 197 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 RNA5SP267-201ENST00000364893 126 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL138885.1-201ENST00000405921 675 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL513475.1-201ENST00000406602 315 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL513175.1-201ENST00000431492 780 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 YWHAZP8-201ENST00000436935 731 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 ARL5AP3-201ENST00000439327 386 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL627224.1-201ENST00000448334 444 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 SNRPGP6-201ENST00000451124 220 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 HMGB1P5-202ENST00000451497 985 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 PRSS3P4-201ENST00000453323 162 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC010099.1-201ENST00000455434 375 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC107398.1-201ENST00000486904 505 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 SNORA74D-201ENST00000516404 141 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 RN7SKP283-201ENST00000517197 270 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AP000790.1-201ENST00000528891 737 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AP000867.2-201ENST00000532468 320 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC087241.2-201ENST00000535801 324 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 MGST1-215ENST00000540056 546 ntTSL 3 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AC007115.1-201ENST00000546853 234 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 MIR4658-201ENST00000584344 65 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 BX323046.1-201ENST00000610145 535 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 BX649567.1-201ENST00000642071 1134 ntBASIC1.95□□□□□ -2.1
AP1S3Q96PC3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.95□□□□□ -2.1
AP1S3Q96PC3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP1S3Q96PC3 RPL21P132-201ENST00000331267 462 ntBASIC1.94□□□□□ -2.1
AP1S3Q96PC3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
AP1S3Q96PC3 MT-TC-201ENST00000387405 66 ntBASIC1.94□□□□□ -2.1
AP1S3Q96PC3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
AP1S3Q96PC3 RNA5SP210-201ENST00000391034 120 ntBASIC1.94□□□□□ -2.1
AP1S3Q96PC3 SNORA48.5-201ENST00000391143 135 ntBASIC1.94□□□□□ -2.1
AP1S3Q96PC3 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
AP1S3Q96PC3 SNORA11C-201ENST00000408532 129 ntBASIC1.94□□□□□ -2.1
AP1S3Q96PC3 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.94□□□□□ -2.1
AP1S3Q96PC3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.94□□□□□ -2.1
AP1S3Q96PC3 AC093156.1-201ENST00000440382 670 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 120 ms