Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC092162.1-201ENST00000432828 434 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RPL12P46-201ENST00000436610 195 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC092647.2-201ENST00000452998 253 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AL162395.1-201ENST00000457882 422 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RN7SL515P-201ENST00000463999 297 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC010683.1-201ENST00000473673 378 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RN7SL814P-201ENST00000487715 300 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC090096.1-201ENST00000489168 390 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC017037.2-201ENST00000513850 890 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RNU6-1038P-201ENST00000516516 104 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 RNA5SP230-201ENST00000517039 122 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 FAM60DP-201ENST00000524174 632 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AP001804.3-201ENST00000525146 880 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 HMGN2P6-201ENST00000551091 273 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 APOOP1-201ENST00000604695 592 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AL627309.6-201ENST00000606857 840 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC092807.2-201ENST00000609367 243 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC008121.3-201ENST00000618726 433 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 uc_338.11-201ENST00000619132 160 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 MIR6839-201ENST00000620425 113 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC018445.2-201ENST00000622987 260 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 AC104260.2-201ENST00000623551 3497 ntBASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
PTCHD1Q96NR3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AL359643.1-201ENST00000404109 423 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RNA5SP296-201ENST00000410523 111 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 BX323014.1-201ENST00000412876 237 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RPL23AP27-201ENST00000415161 451 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RPS3AP52-201ENST00000435639 297 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 HMGB3P11-201ENST00000440127 604 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RPL21P133-201ENST00000443666 476 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RPL23AP43-201ENST00000446445 471 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RPS17P13-201ENST00000448974 407 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RNU7-66P-201ENST00000459469 62 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 RNU6-1208P-201ENST00000459588 107 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC079804.1-201ENST00000461922 436 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC053481.1-201ENST00000467217 306 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC012181.1-201ENST00000479895 423 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC083904.1-201ENST00000487828 231 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 MTCO3P44-201ENST00000510977 541 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC005741.1-201ENST00000511094 432 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 MTND4P7-201ENST00000523876 130 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 DEFB109D-201ENST00000529497 240 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC109635.4-202ENST00000531666 412 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 MDM2-233ENST00000545204 398 ntTSL 5 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC092490.3-201ENST00000545370 572 ntBASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.85□□□□□ -1.63
PTCHD1Q96NR3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms