Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL031667.1-201ENST00000440222 725 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 RPS20P24-201ENST00000457473 361 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC011825.1-201ENST00000484967 388 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 RPL29P14-201ENST00000495837 428 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC112204.1-201ENST00000502591 103 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC109464.2-201ENST00000510242 943 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC093677.1-201ENST00000514414 678 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 RN7SKP116-201ENST00000516902 319 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC022878.1-201ENST00000530684 149 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC245505.1-201ENST00000556398 224 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF519P3-201ENST00000557158 1032 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL451044.1-201ENST00000604867 238 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 NDUFA8P1-201ENST00000605525 367 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AL589743.7-201ENST00000612637 233 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC008250.2-201ENST00000615261 205 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AP005264.7-201ENST00000625003 745 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 AC138649.5-201ENST00000637456 137 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 CCT4P2-201ENST00000233836 1548 ntBASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CDK5RAP3Q96JB5 LARP1BP1-201ENST00000506036 1359 ntBASIC4.65□□□□□ -1.66
CDK5RAP3Q96JB5 AC092447.7-201ENST00000422212 1621 ntBASIC4.65□□□□□ -1.66
CDK5RAP3Q96JB5 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.65□□□□□ -1.66
CDK5RAP3Q96JB5 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.65□□□□□ -1.66
CDK5RAP3Q96JB5 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDK5RAP3Q96JB5 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDK5RAP3Q96JB5 AC007685.1-201ENST00000329806 452 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 Y_RNA.3-201ENST00000362331 103 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP513-201ENST00000364648 118 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-339P-201ENST00000384310 107 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC016712.1-201ENST00000431088 378 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 FAM103A2P-201ENST00000444122 354 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 MTCYBP1-201ENST00000454315 1119 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP246-201ENST00000458909 119 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 snoU109.1-201ENST00000459339 135 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC010469.1-201ENST00000463864 576 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 RPS4XP10-201ENST00000465034 731 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LARP1BP2-201ENST00000486594 519 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 RN7SKP298-201ENST00000515950 94 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 DUXAP2-201ENST00000519198 589 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC090615.1-201ENST00000577519 154 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 MIR3138-201ENST00000585238 82 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC131902.3-201ENST00000611767 581 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC108479.2-201ENST00000617314 601 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC018755.4-201ENST00000619715 454 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC008785.1-201ENST00000624475 456 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 AC116667.1-201ENST00000604855 2072 ntBASIC4.65□□□□□ -1.67
CDK5RAP3Q96JB5 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC092447.10-201ENST00000620607 1652 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP52-201ENST00000362448 134 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 RNU6-263P-201ENST00000363811 107 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 RNA5SP167-201ENST00000365461 116 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 U3.29-201ENST00000391296 212 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 RNU2-66P-201ENST00000410650 161 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC108032.1-201ENST00000416706 207 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AC127526.1-201ENST00000417526 366 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 CHIAP3-201ENST00000423668 1133 ntBASIC4.64□□□□□ -1.67
CDK5RAP3Q96JB5 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms