Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 AL132765.1-201ENST00000434165 553 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC122718.1-201ENST00000439448 744 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AL049734.2-201ENST00000441066 616 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AL512326.1-201ENST00000443050 721 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 WASF1P1-201ENST00000447560 1131 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AL353691.1-201ENST00000451332 387 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 MTND1P12-201ENST00000455231 147 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 FAM133DP-201ENST00000464802 691 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC023598.1-201ENST00000472521 361 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 ST13P14-201ENST00000474095 734 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RPL35P6-201ENST00000490024 372 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RN7SL810P-201ENST00000493031 276 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC015795.1-201ENST00000513669 327 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RNU6-27P-201ENST00000516146 107 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC100770.1-201ENST00000532310 322 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC006504.3-201ENST00000586818 523 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC012507.3-201ENST00000603556 477 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AL365503.1-201ENST00000605247 905 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AL355472.4-201ENST00000610233 626 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC091905.1-201ENST00000624400 311 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC091925.2-201ENST00000625059 256 ntBASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.08□□□□□ -1.76
CTHRC1Q96CG8 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL139811.1-201ENST00000424779 2299 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL049555.1-201ENST00000562834 1933 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC092435.4-201ENST00000623012 4159 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MIR331-201ENST00000362302 94 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RNU6-181P-201ENST00000363225 107 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RNU6-1085P-201ENST00000363576 107 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RNY4P14-201ENST00000363656 96 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RNU6-339P-201ENST00000384310 107 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 SNORD51-201ENST00000384320 80 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC137499.1-201ENST00000427602 88 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MTCO2P11-201ENST00000431069 680 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RPS4XP4-201ENST00000443195 763 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MTND1P9-201ENST00000453775 944 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RN7SL98P-201ENST00000462271 300 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC019235.1-201ENST00000503847 207 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 HIGD1AP3-201ENST00000515857 278 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RN7SKP116-201ENST00000516902 319 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 RNU6-445P-201ENST00000516949 107 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AP003497.1-201ENST00000528472 562 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 OR4P1P-201ENST00000530808 1136 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 HMGB1P33-201ENST00000563485 527 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC107954.1-201ENST00000565906 727 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MIR4277-201ENST00000578298 84 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 MIR548S-201ENST00000581352 82 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC011451.2-201ENST00000604303 598 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC067959.1-201ENST00000604334 379 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL139286.1-201ENST00000604465 483 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC115621.1-201ENST00000604653 858 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AL451044.1-201ENST00000604867 238 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC113403.1-201ENST00000604910 193 ntBASIC4.07□□□□□ -1.76
CTHRC1Q96CG8 AC055876.5-201ENST00000605667 259 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms