Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CDC27P1-201ENST00000445384 715 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 BTF3P5-201ENST00000457252 467 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 snoU109.4-201ENST00000458953 143 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 ST13P14-201ENST00000474095 734 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 RNU6-714P-201ENST00000516963 103 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 VN1R85P-201ENST00000601587 426 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC004853.1-201ENST00000604902 698 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC011816.2-201ENST00000607089 556 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 MIR8059-201ENST00000620427 81 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 CR381572.1-201ENST00000625098 102 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AL136964.1-201ENST00000622038 2990 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 RNU6-1207P-201ENST00000384343 107 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 MIR513A2-201ENST00000385249 127 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 RPL36AP36-201ENST00000418616 301 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AL513174.1-201ENST00000423182 629 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 OR8F1P-201ENST00000425243 930 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AL117339.2-201ENST00000430475 180 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 BTF3P10-201ENST00000433415 495 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AL445669.2-201ENST00000454425 421 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC012170.1-201ENST00000495139 359 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 RPS27AP13-201ENST00000498403 237 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 FABP5P5-201ENST00000515537 406 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 IGHV3-32-201ENST00000519182 355 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC105233.3-201ENST00000531125 744 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 RFPL1S-203ENST00000539579 330 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC104662.1-201ENST00000604448 511 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC055876.5-201ENST00000605667 259 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AL139286.2-201ENST00000606838 396 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC064801.1-201ENST00000612025 407 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC024941.1-201ENST00000612250 334 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 MIR4727-201ENST00000622232 55 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC112484.5-201ENST00000624189 228 ntBASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
CHMP4CQ96CF2 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHMP4CQ96CF2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CHMP4CQ96CF2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
CHMP4CQ96CF2 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHMP4CQ96CF2 AP002001.2-201ENST00000529025 1469 ntBASIC4.9□□□□□ -1.62
CHMP4CQ96CF2 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHMP4CQ96CF2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 RNU6-533P-201ENST00000384144 107 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 Y_RNA.559-201ENST00000384686 107 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 RPL21P65-201ENST00000406094 466 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 SNORA11-201ENST00000408789 128 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 RNU6-628P-201ENST00000410675 107 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC006366.1-201ENST00000422002 759 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC096638.2-201ENST00000434965 711 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 MTND1P28-201ENST00000435623 950 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AC122718.1-201ENST00000439448 744 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 FAM103A2P-201ENST00000444122 354 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 AL162151.2-201ENST00000448875 158 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 PDSS1P2-201ENST00000449397 678 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 USP9YP12-201ENST00000450481 570 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 SSXP1-201ENST00000453640 473 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 RPS20P32-201ENST00000456044 356 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 MTCO1P42-201ENST00000457379 726 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 SNORD108-201ENST00000459332 71 ntBASIC4.9□□□□□ -1.63
CHMP4CQ96CF2 snoU13.3-201ENST00000459441 104 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms