Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC020910.2-201ENST00000603635 610 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC011468.4-201ENST00000603942 409 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AL365503.1-201ENST00000605247 905 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC092354.2-201ENST00000607786 514 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC103710.1-201ENST00000610003 901 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC087241.4-201ENST00000612441 480 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC005332.10-201ENST00000612725 619 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC008498.1-201ENST00000613012 531 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC008121.2-201ENST00000614647 523 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AL590099.1-201ENST00000615276 138 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC026585.1-201ENST00000619582 524 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 AC006065.5-201ENST00000623427 349 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
HPS3Q969F9 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.65□□□□□ -1.67
HPS3Q969F9 NOL8P1-201ENST00000508336 3529 ntBASIC4.65□□□□□ -1.67
HPS3Q969F9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HPS3Q969F9 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 Y_RNA.46-201ENST00000362695 102 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 RN7SKP44-201ENST00000363602 316 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 HMGB3P23-201ENST00000414981 585 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 RSL24D1P6-201ENST00000426934 401 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS3Q969F9 AC073614.1-201ENST00000438690 650 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS3Q969F9 AL645939.1-201ENST00000453429 797 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 RN7SL303P-201ENST00000469773 251 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 BNIP3P41-201ENST00000503774 571 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.64□□□□□ -1.67
HPS3Q969F9 AC025554.1-201ENST00000505641 188 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS3Q969F9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 RNU6-201P-201ENST00000517100 61 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 DUXAP2-201ENST00000519198 589 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AP003467.2-201ENST00000520175 319 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS3Q969F9 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.64□□□□□ -1.67
HPS3Q969F9 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 AC007599.1-201ENST00000568688 1174 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS3Q969F9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS3Q969F9 AC011451.2-201ENST00000604303 598 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 MIR6830-201ENST00000636015 70 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 AC010149.2-201ENST00000637608 315 ntBASIC4.64□□□□□ -1.67
HPS3Q969F9 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HPS3Q969F9 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS3Q969F9 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.64□□□□□ -1.67
HPS3Q969F9 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.64□□□□□ -1.67
HPS3Q969F9 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS3Q969F9 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS3Q969F9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS3Q969F9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS3Q969F9 RNU6-297P-201ENST00000384636 107 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 RPL23AP26-201ENST00000412728 464 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC4.63□□□□□ -1.67
HPS3Q969F9 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 SPA17P1-201ENST00000416656 452 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC4.63□□□□□ -1.67
HPS3Q969F9 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 RPL23AP89-201ENST00000439324 255 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AL022238.1-201ENST00000442557 355 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS3Q969F9 TPT1P7-201ENST00000458300 517 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 snoU13.3-201ENST00000459441 104 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 KLF3P2-201ENST00000465138 268 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 RPL23AP41-201ENST00000484754 458 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 AC108475.1-201ENST00000507880 950 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AC090281.1-201ENST00000523019 276 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.63□□□□□ -1.67
HPS3Q969F9 CYCSP29-201ENST00000533731 318 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 BNIP3P5-201ENST00000562290 498 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AL157394.1-201ENST00000562983 1224 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AC022655.2-201ENST00000577280 318 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AC025165.5-201ENST00000602802 578 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 AC073648.5-201ENST00000603502 305 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 ARF4P1-201ENST00000605447 541 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 FAM27D1-201ENST00000612308 341 ntBASIC4.63□□□□□ -1.67
HPS3Q969F9 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.63□□□□□ -1.67
HPS3Q969F9 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HPS3Q969F9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.63□□□□□ -1.67
HPS3Q969F9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms