Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 RNU6-441P-201ENST00000384545 106 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 Y_RNA.553-201ENST00000384670 102 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 HMGN2P8-201ENST00000391458 268 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 SNRPEP2-201ENST00000397592 279 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 RN7SKP142-201ENST00000411236 328 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 RAB9AP3-201ENST00000412737 573 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 RPL23AP39-201ENST00000415533 405 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 Z99497.1-201ENST00000421282 135 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AL953862.1-201ENST00000423016 168 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 MTND1P30-201ENST00000441241 901 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 RAB9AP1-201ENST00000449393 573 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF4Q92544 SNORD108-201ENST00000459332 71 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC092757.1-201ENST00000467293 467 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 RPL7P49-201ENST00000471402 708 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC004069.2-201ENST00000505438 1114 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 MTND4P2-201ENST00000507767 1203 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC006499.2-201ENST00000513470 337 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC026403.1-201ENST00000518938 295 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC008802.1-201ENST00000519121 791 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AP003033.1-201ENST00000527244 415 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC022968.1-201ENST00000567372 442 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 AL596327.1-201ENST00000603629 213 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 AC127502.3-201ENST00000636170 1206 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 XPOTP1-201ENST00000443317 2398 ntBASIC3.63□□□□□ -1.83
TM9SF4Q92544 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF4Q92544 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF4Q92544 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TM9SF4Q92544 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.63□□□□□ -1.83
TM9SF4Q92544 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 ATP8A2P3-201ENST00000426792 1536 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF4Q92544 RNA5SP88-201ENST00000365560 109 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF4Q92544 RHEBP3-201ENST00000411920 351 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 RPS15AP38-201ENST00000413110 372 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 CYCSP46-201ENST00000423569 204 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 MED14P1-201ENST00000430517 648 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 RPL23AP83-201ENST00000434984 473 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC092427.1-201ENST00000439177 601 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 MTCO1P48-201ENST00000448024 1096 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 RPL36AP33-201ENST00000450395 310 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC006499.5-201ENST00000505037 514 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 USP9YP5-201ENST00000511770 630 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 MTND3P5-201ENST00000512798 333 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC005798.1-201ENST00000513715 387 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC006362.1-201ENST00000567392 174 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AGGF1P4-201ENST00000568249 801 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC239868.4-201ENST00000608318 671 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC013562.2-201ENST00000611632 603 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC012314.7-201ENST00000619693 93 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL356596.1-201ENST00000624230 379 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 AL034408.1-202ENST00000636088 415 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF4Q92544 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
TM9SF4Q92544 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 MTND4P5-201ENST00000435821 1374 ntBASIC3.62□□□□□ -1.83
TM9SF4Q92544 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.62□□□□□ -1.83
TM9SF4Q92544 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 121.7 ms